PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026409836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | WRKY | ||||||||
Protein Properties | Length: 258aa MW: 28675.2 Da PI: 6.5049 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 62.7 | 6.6e-20 | 121 | 177 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgynW+KYGqK++ +++pr r + +gC++ k+v++s+e+ +++++tY+g+H++ XP_026409836.1 121 LDDGYNWKKYGQKDILRAKHPRC-SRSSAEGCKAMKHVQQSDEERSMFIVTYQGKHTC 177 59*******************96.588889**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MENNRTFSMI YLDLKTSIIN ELNQAKELLI KQFQINLDAN YSTKSNLLLP VILYSLDNCL 60 SLMSGINFEA SSQSQATGMI ESSGPVGGNH LRATVPLFRK PQPKWTGHVR ICKQKGLQVS 120 LDDGYNWKKY GQKDILRAKH PRCSRSSAEG CKAMKHVQQS DEERSMFIVT YQGKHTCIEG 180 VSGNNNFSSM TLDIQSTSSS FSGPAASESS SFSIYNILNN SEGRHNLPTS EYDDLCELTS 240 ATSALDPTEV YLDLDSYV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 3e-23 | WRKY family protein |