PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026409518.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 458aa    MW: 50664.8 Da    PI: 6.5125
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026409518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.23e-13247294354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h   E++RR++ N+++  L  l+P++    skK + a++++ A+eYIk+L
  XP_026409518.1 247 TKHFTTEKQRREQFNEKYKALSLLVPNP----SKKQDRATVVQDAIEYIKEL 294
                     5799***********************9....9*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    
MDFELDQQEG LVHDPSSVQT GVFDHSNNNN WQQHQEMQEM QDQLQAEQFY QQQLQNNLQC  60
FNSNPFTQSS TPDLLNLLHL PRCGSGGASS SAASMLPNSS ISFNNNPLNF HTSSLEIFGA  120
SNGNNNEGLH GGENGSGGSS SILYDHPSLH LNNLPPQPPI FRDLFQSLPQ TYGLNGSGAG  180
SSLFGGGIDE REGSIYHHHH DGDGNNNGMR QFENSVLDFR RSKNINISGV GGSSSTGGFR  240
RASSHGTKHF TTEKQRREQF NEKYKALSLL VPNPSKKQDR ATVVQDAIEY IKELRRTVDE  300
LKILVDKKRC GSRNKKLKTE EEAAAAAATG DMESSTMKPT SNGNADRDQN SFNGPVRSSW  360
LQRKSKETEV VVRIIDDDVT IKLIQRSKMN NLLLVSRIID ELQLDLLHVS GGCIGDHYSF  420
WFNTKINEGS SVYASAIAKK LIEGVDKNYA ASKPENNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.17e-61bHLH family protein