PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026409306.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 875aa    MW: 94367.2 Da    PI: 6.26
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026409306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox642.2e-20145200156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+++l L+ rqVk+WFqNrR+++k
  XP_026409306.1 145 KKRYHRHTPQQIQELEALFKECPHPDEKQRNELSRRLVLEARQVKFWFQNRRTQMK 200
                     688999***********************************************999 PP
2START191.63.9e-603635862206
                     HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     la +a++elv++a+ +ep+W  ss     e  n+de+++ f++  +     + +ea r++gvv+ +++ lve+l+d k ++  +++    ++ t+
  XP_026409306.1 363 LAMAAMEELVRMAQTNEPLWIPSSfeggkETFNRDEYTRMFAPCIGskpngFVTEATRETGVVIVNSVALVETLMDAK-RYVDMFPcviaRCNTT 456
                     57799**********************99999*********9988899999***************************.99999999999***** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      galqlm ae+q+lsplvp R++ f+R+++q+ +g+w++vd+Svd +q+++ + s   +++lpSg++i++++ng++kvtwveh+
  XP_026409306.1 457 DVISSGvggtrnGALQLMHAEFQVLSPLVPiREVNFLRFCKQHAEGVWAVVDISVDANQENS-DTSTYLSRRLPSGCVIQDMPNGYCKVTWVEHA 550
                     **************************************************************.66666679************************ PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h ++++lv+ gl +ga +wvatlqrqce+
  XP_026409306.1 551 EYDENSIHRIYQPLVNAGLGFGAHKWVATLQRQCEC 586
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 875 aa     Download sequence    
MSSFGGFFDN SSTTTATTTT TGGGGGGGGG VRVVSDIPLN NMPTGVISQS RVVNHNHHHH  60
HPYHKPAAVF KSPGLSLALQ TNNMDGHGGG GDRFGENLDG GSGLLGGGAR LLGGRELDEY  120
ESRSGSDNMD GANSDDQDTD KPPRKKRYHR HTPQQIQELE ALFKECPHPD EKQRNELSRR  180
LVLEARQVKF WFQNRRTQMK TQIERHENSI LRQENDKLRA ENMNVREAMR NPMCNNCGGA  240
AVLGDVSLEE QHLRVENARL KEELDRVCAL AGKFLGRPVS SIGDPLPPSM QISAGLDLAV  300
GINGGFGGMS GVNPNLLMGN NNNQFRGSGG SGGMPAMSMV PHQQQSISSG VDRSVENSMY  360
LDLAMAAMEE LVRMAQTNEP LWIPSSFEGG KETFNRDEYT RMFAPCIGSK PNGFVTEATR  420
ETGVVIVNSV ALVETLMDAK RYVDMFPCVI ARCNTTDVIS SGVGGTRNGA LQLMHAEFQV  480
LSPLVPIREV NFLRFCKQHA EGVWAVVDIS VDANQENSDT STYLSRRLPS GCVIQDMPNG  540
YCKVTWVEHA EYDENSIHRI YQPLVNAGLG FGAHKWVATL QRQCECIAIL MSNMPIRDHT  600
GITQSGRKSM LKLAQRMTQN FCAGVCPSSV HKWNRLSAGN VDADVRVMTR KSIDDPGEPP  660
GVVLSAATSV WLPISPQKLF DFLRDERLRS EWDILSNGGP MQQMSHINKG QDPGNCVSLL  720
RAGAMNASQS SMLILQETCI DASGSLVVYA PVDIPAMHVV MSGGDSAYVA LLPSGFSIVP  780
DGGPNRQSIS NCADPPNSNN NDGSNGGEDG GGSSSQQLTS DAAGPGASGS LLTVAFQILV  840
NSLPTAKLTV ESVETVNNLI SCTVQKIKAA LNCEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein