PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026408916.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 380aa    MW: 42026.7 Da    PI: 6.0378
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026408916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.10.000172372761155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R ++i +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_026408916.1 237 VRKEKIGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 276
                     57789999*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MNRGFLESLP VQQMMMSAGN PNWWNINNTV KPPPLLHSQL QPNPSTTSLL PQYPPSSLPL  60
NFLENDHNHQ ELPESWCQLL MGGSPIVEEG DERLGLSNQY NQQVKKLENW EEQIFYPSEA  120
NDNNSSIVDH VKQEVSESAA YAYGLVSNGE FQTSNGRVVP NWSPHHQVMP VSSPSSCVTS  180
FSSNSMLDFS TTKSDNTHGT KHHPQPDHSS ECNSTATGGA FKKARVQQSS TQSTFKVRKE  240
KIGDRITALH QLVSPFGKTD TASVLLEAIG YIRFLQNQIE ALSLPYLGSG SGNMNQQLQH  300
QQQSVQGEKN CIFPEDPGQL LHVDTNNMKR RGVPDQDSEN APRMDLRSRG LCLVPLACTL  360
QVGSDNAADF WAPTLGGGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-82bHLH family protein