PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026408887.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 364aa    MW: 40278.4 Da    PI: 6.9971
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026408887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.92e-14189235455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++Er+RR+++N++f  L  ++P +     kK++Ka++L  A++YIk+Lq
  XP_026408887.1 189 DHVMAERKRREKLNQRFIALSAVVPGL-----KKMDKASVLGDAIKYIKQLQ 235
                     699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MENSSIQCLS DMGMEDLIFN NQYSYMNTID EFSAQQIAAA FGENFTRQYF SSNQSFSTYP  60
AFMETHQRSV KQLKTTDSWT SCRRTAADHN NQHISAPPES FSLSNLISFD KNGQTSPTIP  120
HQASQVCENI GGPVNPKEEA VVLPAGNKST MDPSDVSYMN VNSASEQQGK KKTSTAATED  180
NEKSCANKDH VMAERKRREK LNQRFIALSA VVPGLKKMDK ASVLGDAIKY IKQLQEKVKL  240
LEEQTTKKTL ESVIFMKKTQ IFADDIDSSS SSENSVAGST YGEPLPEIEA SASHKTVLIR  300
IHCQKRNGVF VKILSQIEKL HLSIISSNAI PFDNSSLAIT LTAQMNAEHC ITVTDLVKSL  360
RSVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194199ERKRRE
2195200RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-49bHLH family protein