PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408193.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 300aa MW: 32356.8 Da PI: 9.1763

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.3	1.4e-38	44	165	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 a+kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ a+s s+ +sn ss XP_026408193.1 44 AVKKPPAKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-AVSLSVRSSNTSSMsspldqkp 137 789***************************************************************999777.3333333332222223455555 PP TCP 89 ...........................k 89 + XP_026408193.1 138 ininhnnqilnptpfllgkrirlddnnN 165 5565555566666666555555544432 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MATTDGISHG GVLIDPSSRQ QQQQQQLQQQ QTGTTTTGNN GVLAVKKPPA KDRHSKVDGR 60 GRRIRMPIVC AARVFQLTRE LGHKSDGQTI EWLLRQAEPS IIAATGTGTT PASFSAVSLS 120 VRSSNTSSMS SPLDQKPINI NHNNQILNPT PFLLGKRIRL DDNNNDIENH NHNHGDDHDK 180 NDNSNGGVSV TTAMAAAAGG GFWAVPARPD YGQVWSFSAT PDMVLPTPAA LMASQPFMSA 240 ARFSQQHQQH QQQQQQQMNE AAASGVRLGN YFPVTQGHLN LLASMSTQPA SSGGRDDEPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-43	TCP family protein