PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026408041.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 834aa    MW: 93191.3 Da    PI: 6.1044
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026408041.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.82.1e-23122223199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_026408041.1 122 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 212
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_026408041.1 213 KNQLLLGIRRA 223
                     9999****997 PP
2Auxin_resp116.81.8e-38248331183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k+ ka+  ++vsvGmRf+m fete+ss rr++Gt++g+ dldp rWpnS+Wrs+k
  XP_026408041.1 248 AAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGIVDLDPARWPNSHWRSVK 331
                     79********************************87599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 834 aa     Download sequence    
MKLSSSSGLG QQSHEGSEKR CLNSELWHAC AGPLVSLPTV GSRVVYFPQG HSEQEVDGHI  60
PNYPNLPPQL ICQLHNVTMH ADVETDEVYA QMTLQPLTQQ EQKDTYLPAD LGIPSKQPTN  120
YFCKTLTASD TSTHGGFSVP RRAAEKVFPP LDFSQQPPAQ ELIARDLHDV EWKFRHIFRG  180
QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NEKNQLLLGI RRASRPQTVM PSSVLSSDSM  240
HIGLLAAAAH AAATNSRFTI FYNPRASPSE FVIPLSKYAK AVFHTRVSVG MRFRMLFETE  300
ESSVRRYMGT ITGIVDLDPA RWPNSHWRSV KVGWDESTAG ERQPRVSLWE IEPLTTFPMY  360
PSLFPLRLKR PWHPGVSSFN DNKDDPTNAL MWLRGDTADR SLQSLNFQGL GMAPWMQQRL  420
DPSLLGNEHD QRYQTITAAA LQDIRGGDPM KQQYMQFQQP LQYLQQSCNP NQLLQEQQII  480
QQSHPQQILH AQSQTMSDNQ SSPILQQPPN GQHSQNQQSQ QHQHNFQQNF QIPNNQFEQQ  540
ETPMSTFVHK PDFTDSNITF SAPLSPSIQN MLGSICPEGS GNLLNFSRTS QSMLNDQQNQ  600
QSWAPKFSYS QANNFGNSGS LPPFPGKDGI VEPDNCSGDM QTQQFFGVNM DSSPLLIPGA  660
VPTLGSTSID AEVSPMPFDG SGYQRSLFGC VDDSSEFVQS AAPVDPPTRT FVKVYKSGST  720
VGRSLDIGRF SSYDELREEL GQMFGVEGQL GPLRSGWQLV FVDRENDVLL LGDDPWEAFV  780
NNVWYIKILS PEDVLKLGKH GIESLSSNGQ RLNSNTCDSR NLVSGISSVG SLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein