PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026408040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARF | ||||||||
Protein Properties | Length: 841aa MW: 93863.1 Da PI: 6.1833 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.8 | 2.1e-23 | 129 | 230 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_026408040.1 129 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 219 99*****************************8544444..48************************************************..889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+++++r+ XP_026408040.1 220 KNQLLLGIRRA 230 9999****997 PP | |||||||
2 | Auxin_resp | 116.8 | 1.9e-38 | 255 | 338 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k+ ka+ ++vsvGmRf+m fete+ss rr++Gt++g+ dldp rWpnS+Wrs+k XP_026408040.1 255 AAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGIVDLDPARWPNSHWRSVK 338 79********************************87599******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 841 aa Download sequence |
MKLSSSSGLG QQSHEGSEKR CLNSELWHAC AGPLVSLPTV GSRVVYFPQG HSEQVAASTN 60 KEVDGHIPNY PNLPPQLICQ LHNVTMHADV ETDEVYAQMT LQPLTQQEQK DTYLPADLGI 120 PSKQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDF SQQPPAQELI ARDLHDVEWK 180 FRHIFRGQPK RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA SRPQTVMPSS 240 VLSSDSMHIG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLSKYAKAVF HTRVSVGMRF 300 RMLFETEESS VRRYMGTITG IVDLDPARWP NSHWRSVKVG WDESTAGERQ PRVSLWEIEP 360 LTTFPMYPSL FPLRLKRPWH PGVSSFNDNK DDPTNALMWL RGDTADRSLQ SLNFQGLGMA 420 PWMQQRLDPS LLGNEHDQRY QTITAAALQD IRGGDPMKQQ YMQFQQPLQY LQQSCNPNQL 480 LQEQQIIQQS HPQQILHAQS QTMSDNQSSP ILQQPPNGQH SQNQQSQQHQ HNFQQNFQIP 540 NNQFEQQETP MSTFVHKPDF TDSNITFSAP LSPSIQNMLG SICPEGSGNL LNFSRTSQSM 600 LNDQQNQQSW APKFSYSQAN NFGNSGSLPP FPGKDGIVEP DNCSGDMQTQ QFFGVNMDSS 660 PLLIPGAVPT LGSTSIDAEV SPMPFDGSGY QRSLFGCVDD SSEFVQSAAP VDPPTRTFVK 720 VYKSGSTVGR SLDIGRFSSY DELREELGQM FGVEGQLGPL RSGWQLVFVD RENDVLLLGD 780 DPWEAFVNNV WYIKILSPED VLKLGKHGIE SLSSNGQRLN SNTCDSRNLV SGISSVGSLE 840 Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G37020.1 | 0.0 | ARF family protein |