PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026407810.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 492aa MW: 55640.5 Da PI: 4.6049 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.4 | 4.3e-34 | 58 | 197 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..... 79 lp+G++F+P+d+e++++ L +kv +++ + + v+++ +i++++P++Lp vk++ + ++fF+++ k+y+tg+rk+r+++ XP_026407810.1 58 LPRGVKFDPSDQEIIWH-LLAKVGHNNmkphpfI---DefiptVVEDDGICYTHPQNLP-GVKQDGNVVHFFHRAIKAYNTGTRKRRKIHgddqg 147 699************65.5566666663555442...144444577778**********.777888999******************85555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tg++k+v+ +g + g+kk++v+y +r +k+ekt+Wvmh+y+l XP_026407810.1 148 DVRWHKTGRTKPVIL-DGVQRGCKKIMVLYisMARGKKPEKTNWVMHQYHL 197 788************.99************8756777888*********98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 492 aa Download sequence |
MAGTSWLVDS RRIATKIMSA SEKCDPRTVQ WRSDPTRACP NCDHVIDNSD VIQAWPGLPR 60 GVKFDPSDQE IIWHLLAKVG HNNMKPHPFI DEFIPTVVED DGICYTHPQN LPGVKQDGNV 120 VHFFHRAIKA YNTGTRKRRK IHGDDQGDVR WHKTGRTKPV ILDGVQRGCK KIMVLYISMA 180 RGKKPEKTNW VMHQYHLGTA EEEKDGEFVV SKVFYQQQLK PGDKVEQDLP LEETDSITAK 240 VDPVTPKSVI PEPPRAGKQH SDVNPRQELS FMETSEENLE TAELGDDVLA EWGELNDHCH 300 LKGEDNGCQA VEDDNHQTEE NDNQTGVDDD NHTNTNLWDG DSQLPFDAQQ MVFDSQQMIF 360 DSQQMVEGLS LCDEFLVSQS PHRVEGGVGK ERKIKSRLSD YAPYGAEDLK KDLEECQSLG 420 SPGPINNEGE KDVRPFDSGY AQTDNQENRQ DSEQSQNLGI FDPSNLDLET PPDFRLSQLE 480 FGSQDIYAWK GF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G25580.1 | 1e-158 | NAC family protein |