PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407402.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 657aa MW: 72792.1 Da PI: 6.579

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.4	4.5e-31	293	350	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk++ers+ d++v+ei+Y+g+H+h+k XP_026407402.1 293 EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCQVKKQLERSH-DGQVTEIIYKGKHDHPK 350 7**************************************.*************85 PP
2	WRKY	107.1	8.9e-34	464	522	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_026407402.1 464 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 522 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MEEGNVQSEV RDSYGRVIEE ENRVHEVRFD TSNGGNENGF TFGSSDNNNN NGLRNLGEEE 60 KKDLCIKSSD YRSINFSSGS SNNTSAARYK SMSPAMLPIS RSPCLTIPPG LTPTSLLDSP 120 VFLSNMKAEP SPTTGTFFKH HIMHDSAFSD TFPVPRNTSN NSTFDERSFG DFEFKPHVRS 180 SLGSAVSSFG PMASAGLNQK QSESFMQMQG QCLSPTFASS PKSETREPSS HGLTLSVNAP 240 NVPVETITSK ACGPVEVASG ESLQIPNSET AIQPMECDDK GASTVVTAER SSEDGYNWRK 300 YGQKHVKGCE FPRSYYKCTH PNCQVKKQLE RSHDGQVTEI IYKGKHDHPK PQPSRRMAVG 360 TVISMQEERS DRFSSLTARE DKTHGMPSHH AEPNGIRDVS PVMASDDNVE NAQWNRNGDE 420 LDDDDDPESK RRKKDLGGVD VTLMGKATRE PRVVVQTLSE VDILDDGYRW RKYGQKVVKG 480 NPNPRSYYKC TNAGCPVRKH VERASHDPKA VITTYEGKHN HDVPSARNST HEPAEPTNYN 540 ASSNGMLRVR QEENDSISLD LGVGMTSSPE NRLNEKQHQT FHGGPIENRS FMNHPGCSNV 600 MQATQVSAHY GSLIDGTDRY NPSREDQTKS FTFETPPPLN HSTNQYQQSL GRLIMGP

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MEEGNVQSEV RDSYGRVIEE ENRVHEVRFD TSNGGNENGF TFGSSDNNNN NGLRNLGEEE  60
KKDLCIKSSD YRSINFSSGS SNNTSAARYK SMSPAMLPIS RSPCLTIPPG LTPTSLLDSP  120
VFLSNMKAEP SPTTGTFFKH HIMHDSAFSD TFPVPRNTSN NSTFDERSFG DFEFKPHVRS  180
SLGSAVSSFG PMASAGLNQK QSESFMQMQG QCLSPTFASS PKSETREPSS HGLTLSVNAP  240
NVPVETITSK ACGPVEVASG ESLQIPNSET AIQPMECDDK GASTVVTAER SSEDGYNWRK  300
YGQKHVKGCE FPRSYYKCTH PNCQVKKQLE RSHDGQVTEI IYKGKHDHPK PQPSRRMAVG  360
TVISMQEERS DRFSSLTARE DKTHGMPSHH AEPNGIRDVS PVMASDDNVE NAQWNRNGDE  420
LDDDDDPESK RRKKDLGGVD VTLMGKATRE PRVVVQTLSE VDILDDGYRW RKYGQKVVKG  480
NPNPRSYYKC TNAGCPVRKH VERASHDPKA VITTYEGKHN HDVPSARNST HEPAEPTNYN  540
ASSNGMLRVR QEENDSISLD LGVGMTSSPE NRLNEKQHQT FHGGPIENRS FMNHPGCSNV  600
MQATQVSAHY GSLIDGTDRY NPSREDQTKS FTFETPPPLN HSTNQYQQSL GRLIMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-156	WRKY family protein