PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407303.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 385aa MW: 43042.4 Da PI: 4.5402

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.6	6e-54	6	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+elv++yLkkkveg++++l evi+ +++yk+ePw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++++ XP_026407303.1 6 LPPGFRFHPTDDELVSYYLKKKVEGQNFDL-EVIPVIELYKYEPWELPdKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIV 99 79**************************.99**********96434556788********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ +g +ktLvfy+grap g +tdWvmheyrl XP_026407303.1 100 CQSEGITGFRKTLVFYRGRAPAGDRTDWVMHEYRL 134 999****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MGSSSLPPGF RFHPTDDELV SYYLKKKVEG QNFDLEVIPV IELYKYEPWE LPDKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKIVC QSEGITGFRK TLVFYRGRAP 120 AGDRTDWVMH EYRLTDDIPQ GSSGSQGAYA LCRVVKKNEP GQKYGEFHGE SNSKWVGGLP 180 STVNANSSAF QSGLSSTSGD NTSHISSPNN GSNYLTPAAS PYDSRMTVNF GLTSVDTGVT 240 NEWMSSDLIL DTSKAGPSGD ASEYLQDYES TNQITSWSQC QTDSIEIMPT PSYSNFMAEV 300 EPTYDFAQNN MSSYLGEMNY MGFYGEEDST YPTLGTTDSL RNLNYTINGF EAWNPTGPNP 360 ICRQTSGDGS LVELANSWMQ EEIAW

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MGSSSLPPGF RFHPTDDELV SYYLKKKVEG QNFDLEVIPV IELYKYEPWE LPDKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKIVC QSEGITGFRK TLVFYRGRAP  120
AGDRTDWVMH EYRLTDDIPQ GSSGSQGAYA LCRVVKKNEP GQKYGEFHGE SNSKWVGGLP  180
STVNANSSAF QSGLSSTSGD NTSHISSPNN GSNYLTPAAS PYDSRMTVNF GLTSVDTGVT  240
NEWMSSDLIL DTSKAGPSGD ASEYLQDYES TNQITSWSQC QTDSIEIMPT PSYSNFMAEV  300
EPTYDFAQNN MSSYLGEMNY MGFYGEEDST YPTLGTTDSL RNLNYTINGF EAWNPTGPNP  360
ICRQTSGDGS LVELANSWMQ EEIAW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	3e-88	NAC family protein