PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026407006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 26331.6 Da PI: 8.1345 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.4e-18 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v ++G g+W+ +a++ g++R++k+c++rw +yl XP_026407006.1 16 KGPWTAEEDRLLNEYVSMHGEGRWSCVAKCAGLNRSGKSCRLRWVNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.6 | 7.9e-15 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g T++E+ ++ +++ ++G++ W+ Iar+++ gRt++++k++w+++ XP_026407006.1 69 KGQLTPQEQSIITELHSLWGNK-WSMIARCLP-GRTDNEIKNYWRTH 113 5778******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MAGVDGWGMT DKGLRKGPWT AEEDRLLNEY VSMHGEGRWS CVAKCAGLNR SGKSCRLRWV 60 NYLKPGLKKG QLTPQEQSII TELHSLWGNK WSMIARCLPG RTDNEIKNYW RTHFKITKPN 120 RRRQDKPRTS ALRRQQFRRQ QQQQQQDQQE AKQKQVEETV TSAQVDNKQA MELLMCTNLE 180 DEQCRPVMFQ DDHENIRPSD FIDDVEEGAY WGGLWNMDDV HIDHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30210.1 | 5e-69 | MYB family protein |