PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026406990.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 288aa    MW: 31553 Da    PI: 5.4315
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026406990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.79e-13224269655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k Lq
  XP_026406990.1 224 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKLLQ 269
                     689*********************7....688***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MGFNGGGGES NRGLIRFWSA PSTWLDTLIQ PDDDVDDEGI NTTTNPISIP KPQQPKITPP  60
LPPSSNLPPQ IPTLSRNNSA SINYIASSAA ASPVTNAFFD NTATSGGGDL GFLRQNSSPA  120
ELLARLTSLP ASVGSDGFLS SYGGSGNYEY NLSSCLDFPS NNNNKRSRDS DFQQESPKIS  180
PHPLKGEQSG DYGNYGDMEM EKLFEDSVPC RVRAKRGCAT HPRSIAERVR RTRISDRIRK  240
LQELVPNMDK QTNTADMLEE AVEYVKLLQK QIQELSEHQQ NCKCLVRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.13e-55bHLH family protein