PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026406787.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | WRKY | ||||||||
Protein Properties | Length: 276aa MW: 31041 Da PI: 9.2986 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95 | 5.3e-30 | 154 | 213 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ k+++ pr+Y+rC+ a +Cpvkkkv+rs ed++v++ tYegeHnh+ XP_026406787.1 154 VKDGYQWRKYGQKVTKDNPSPRAYFRCSLApSCPVKKKVQRSFEDKSVLVATYEGEHNHS 213 58**************************999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MGNLVQDDSS LSLELNINPL VHYKESSGGR GSLIHELNRM STDNKKLKEM LIEIAKKLNT 60 MQNHLTEFIS ENQANLSSTT TTSKKRKANG QEVKDNTDCI PSSTSNSVII SNSMENSSMS 120 GDENSWKKPR EYLRSTKILR TYSRLDPSDT SLQVKDGYQW RKYGQKVTKD NPSPRAYFRC 180 SLAPSCPVKK KVQRSFEDKS VLVATYEGEH NHSLHPNVTL LDLTRTGLCD DVKQCNLKTD 240 QYGMQRFLIE KMASSLAQDP IFKASLASAI SGRVHD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31800.2 | 4e-58 | WRKY family protein |