PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026406741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | GRAS | ||||||||
Protein Properties | Length: 643aa MW: 71988.4 Da PI: 7.0161 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 415.9 | 3.5e-127 | 264 | 627 | 4 | 373 |
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 L++c+e +ss+++++++ +L+rl elasp+g+p++R++ayfteALa r ar ++++++ p++ + + ++e+++al+l+++vsPi+kf h+t XP_026406741.1 264 FLVACVESISSKNMSAITYYLSRLGELASPEGNPIRRVTAYFTEALALRAARLWPHIFHVSVPRDID-RAEDETASALRLLNHVSPIPKFLHFTS 357 599*******************************************************999888886.7899999******************** PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193 N++ l+++eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+g+ sk+ l+etg+rLa fA++l++pfef++ v++rled++l++ XP_026406741.1 358 NEMYLRSFEGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGIGE----SKQDLQETGDRLALFASALNLPFEFHP-VVDRLEDVRLWM 447 ***************************************************....9**************************.7*********** PP GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288 L+vk++E++aVn++lqlh++l +++ +++L ++ s++P +v ++e+ea+hns+s+ +r++++l+yysa+fdsl+++lp +s rik+E++ XP_026406741.1 448 LHVKEKESVAVNCILQLHKMLYDQTGGVL--RDFLGMILSTNPGIVLMAEEEAEHNSPSLETRVSNSLKYYSAIFDSLDSNLPLNSPVRIKIEEM 540 ********************976655554..79************************************************************** PP GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373 ++rei+n+v+ceg +r erhe + kWr + + GFk++ +++++ q ++ll++++sd +++e e+ + l+l W d++L++vSaW XP_026406741.1 541 -FAREIRNIVSCEGIDRSERHECFDKWRVSMAQGGFKNIVIEDREILQSRMLLKMYSSDKFSLEkrgEDGAGLTLKWLDQSLYTVSAW 627 .********************************************************999****6655578888************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 643 aa Download sequence |
MLAGCSKLLS PTRHRLRSEA TAQFQAVCSF QLPSMSTQRR ELPCTFTRNT SRSQQPIRPV 60 GLSVEKGFES KGSCSIRHKS RPPPSLSIPQ PLIWEGRRGV EDVFWEEEKK SLKRQNSSDE 120 CGVNRVKRKR CSSDSELGSE NIWFSQNVAG SGVTGTETPS LTAAKEERVS FLPRSTWMDF 180 VVNEITATGD RGAAETSRAI TKVKPGSSNS SESRSLTLKP EDNSSDDIEI GNGTRVPYPS 240 EGRLTARNGG DVQPEHQDFE LLGFLVACVE SISSKNMSAI TYYLSRLGEL ASPEGNPIRR 300 VTAYFTEALA LRAARLWPHI FHVSVPRDID RAEDETASAL RLLNHVSPIP KFLHFTSNEM 360 YLRSFEGKDR VHIIDFDIKQ GLQWPSLFQS LASRANPPSH VRITGIGESK QDLQETGDRL 420 ALFASALNLP FEFHPVVDRL EDVRLWMLHV KEKESVAVNC ILQLHKMLYD QTGGVLRDFL 480 GMILSTNPGI VLMAEEEAEH NSPSLETRVS NSLKYYSAIF DSLDSNLPLN SPVRIKIEEM 540 FAREIRNIVS CEGIDRSERH ECFDKWRVSM AQGGFKNIVI EDREILQSRM LLKMYSSDKF 600 SLEKRGEDGA GLTLKWLDQS LYTVSAWAPV DVAGTSSVKS QPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63100.1 | 0.0 | GRAS family protein |