PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406706.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 565aa MW: 63666.9 Da PI: 6.5083

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.2	7.8e-28	318	371	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++Wt++LH+rFv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYRl XP_026406706.1 318 KMKVDWTQDLHKRFVKAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRL 371 5689***************.******************************8 PP
2	Myb_DNA-binding	43	1e-13	321	370	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+++++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_026406706.1 321 VDWTQDLHKRFVKAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 370 57***********************************************7 PP
3	Response_reg	29.8	3.1e-11	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedalealka 92 +l+ d++ + ++ le+ +y +v ++ d ea+e l +k +++ ++ ++ + + +k +++++ +lp i+++++ +++ +++ + XP_026406706.1 20 ILLLDEDIHSAAEIKLKLEQMDY-IVSAFCDENEAMEALSNKCesYHVAIVEVSTGNnLG---SFKFLENAK-DLPTIMISSTHCVSTTMKCIAL 109 68888888999999999****.***********877767*9988877344...455565655.8***************** PP TESEEEESS--HHHHHH CS Response_reg 93 GakdflsKpfdpeelvk 109 Ga +fl Kp ++e+l++ XP_026406706.1 110 GAAEFLQKPLSEEKLRN 126 ************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MVCTTDDLLE WKDFPKGLRI LLLDEDIHSA AEIKLKLEQM DYIVSAFCDE NEAMEALSNK 60 CESYHVAIVE VSTGNNLGSF KFLENAKDLP TIMISSTHCV STTMKCIALG AAEFLQKPLS 120 EEKLRNIWQH VVHKAFNAGE HSLSKMLNPT EETVSPVLQP AVEKDESKVQ TSLVEIEDLT 180 RRHELHHDQS TASDKFPAPS TPQLKQSGRL LGESECQEQP NCPVEKDPMD HDGDAKSVEN 240 SCNISVENIT AKVDSSSMLV NDSIKEEGPT SGSKSANHLR PRQKSNDSII NSKVEAGNPK 300 KASTSHQNSY VTRASRKKMK VDWTQDLHKR FVKAVEQLGV DQAIPSRILE LMKVEGLTRH 360 NVASHLQKYR LNRRHILPKE EDRRWHHPNR HSTPRSNYQQ HKPIMAYPSY PPSSHPICHV 420 WGHPSSHLPP PTAQTWGHPS FPTWQTPENW QWKTFPGMHV DAWGCPVMPP SQNPNFTIPQ 480 MQNNASAGYQ SLLDTTFEDS SSMAMIESNQ LAEEVIDKAV REALDMPWLP LPLGLKPPST 540 ESVLFELQRQ GISIIPPQNP NTMWQ

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MVCTTDDLLE WKDFPKGLRI LLLDEDIHSA AEIKLKLEQM DYIVSAFCDE NEAMEALSNK  60
CESYHVAIVE VSTGNNLGSF KFLENAKDLP TIMISSTHCV STTMKCIALG AAEFLQKPLS  120
EEKLRNIWQH VVHKAFNAGE HSLSKMLNPT EETVSPVLQP AVEKDESKVQ TSLVEIEDLT  180
RRHELHHDQS TASDKFPAPS TPQLKQSGRL LGESECQEQP NCPVEKDPMD HDGDAKSVEN  240
SCNISVENIT AKVDSSSMLV NDSIKEEGPT SGSKSANHLR PRQKSNDSII NSKVEAGNPK  300
KASTSHQNSY VTRASRKKMK VDWTQDLHKR FVKAVEQLGV DQAIPSRILE LMKVEGLTRH  360
NVASHLQKYR LNRRHILPKE EDRRWHHPNR HSTPRSNYQQ HKPIMAYPSY PPSSHPICHV  420
WGHPSSHLPP PTAQTWGHPS FPTWQTPENW QWKTFPGMHV DAWGCPVMPP SQNPNFTIPQ  480
MQNNASAGYQ SLLDTTFEDS SSMAMIESNQ LAEEVIDKAV REALDMPWLP LPLGLKPPST  540
ESVLFELQRQ GISIIPPQNP NTMWQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-130	ARR-B family protein