PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026406537.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 892aa    MW: 99699.3 Da    PI: 8.5681
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026406537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.91.3e-06268288425
                     ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                     ++C +f++ G C+ G++C++aH
  XP_026406537.1 268 RPCIDFLE-GNCRKGSSCRYAH 288
                     79******.************* PP

2zf-CCCH28.23.4e-09321342325
                     S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaH 25 
                     ++lC+f+a+ G+C+ Gd+C+F+H
  XP_026406537.1 321 QRLCKFYAA-GYCRNGDSCRFSH 342
                     68***9999.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 892 aa     Download sequence    
MTESVRRRSS KWDLKEDPDH FPAEIRQGSG WSGRGGEFTH EKESRSEWKI SKGLNSHDPK  60
WSSMEARSVS RNEGNSRWSS SLEPTAQNRG IEIYEFDKRD YNDMSRSMAL DGDRSYSLSM  120
SPGLDGWREK NRSRSPKGGW SRSHRSRSRS RSPPHGYRRD LEGSNGGRRS GSRVCGEFAE  180
ERSIRGNSHR FLHQDIQDTY EHNGRRHPGR SPGRGGSSKH EKGGIRNAYT EEQMDRPRDK  240
ISRGYKDVYH RDLEKSEILR SNNISSDRPC IDFLEGNCRK GSSCRYAHHG APSEGCGIRV  300
RDLDRKETTV FYGHDNKRES QRLCKFYAAG YCRNGDSCRF SHEGAARGSP EGRSRDDRRG  360
HDLDHENRLQ GGSKWSDKQP ADSAYDGPDA RSVTEKLVHH LSDENRSWGA PKWSDITDSH  420
SAGNEKKSSR GSKWSDRDAA PEEKSNVWGN DNVGEKIGVV DPRSKERSFN SQQSHLDNAS  480
RTWGGPSRND KPIDFTLHKS PQWISDNSGG SMGFEEPKAS GKFLASESMI STRDIEQYSL  540
SINDSRGHNQ DSQSHITNEM SIKIGKPDVT QEVSAQPLSS FNMNTQSQTV LPTQPFNLNG  600
GTQQQSSNPY SRTHPQHVEP IKKSDLVDPR LTLQQVTSGT SMTQNISTNE TVAQLTNLSA  660
SLAQIFGNGQ HLPQLYAALN PSTSGLVSSH PIEPTQVIAP QPLIHLNQTT HCEKQYDPIN  720
DSIDQTDLAG GGSQSPMKSI LPSSTAADPS GGDPPKISSL EENVNASNEL KQPEKVMDKK  780
EETVQMDADG DGDGDNQGDE EGKKSKDPKG MRMFKFALVQ FVKEILKPTW KEGQMSKEAH  840
KTIVKKVVDK VTSTIQAAQI PQTQEKTDQY LSYSKPKLTK LVQAYVEKHS KT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.11e-14C3H family protein