PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026406537.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 892aa MW: 99699.3 Da PI: 8.5681 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.9 | 1.3e-06 | 268 | 288 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C +f++ G C+ G++C++aH XP_026406537.1 268 RPCIDFLE-GNCRKGSSCRYAH 288 79******.************* PP | |||||||
2 | zf-CCCH | 28.2 | 3.4e-09 | 321 | 342 | 3 | 25 |
S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 3 telCrffartGtCkyGdrCkFaH 25 ++lC+f+a+ G+C+ Gd+C+F+H XP_026406537.1 321 QRLCKFYAA-GYCRNGDSCRFSH 342 68***9999.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 892 aa Download sequence |
MTESVRRRSS KWDLKEDPDH FPAEIRQGSG WSGRGGEFTH EKESRSEWKI SKGLNSHDPK 60 WSSMEARSVS RNEGNSRWSS SLEPTAQNRG IEIYEFDKRD YNDMSRSMAL DGDRSYSLSM 120 SPGLDGWREK NRSRSPKGGW SRSHRSRSRS RSPPHGYRRD LEGSNGGRRS GSRVCGEFAE 180 ERSIRGNSHR FLHQDIQDTY EHNGRRHPGR SPGRGGSSKH EKGGIRNAYT EEQMDRPRDK 240 ISRGYKDVYH RDLEKSEILR SNNISSDRPC IDFLEGNCRK GSSCRYAHHG APSEGCGIRV 300 RDLDRKETTV FYGHDNKRES QRLCKFYAAG YCRNGDSCRF SHEGAARGSP EGRSRDDRRG 360 HDLDHENRLQ GGSKWSDKQP ADSAYDGPDA RSVTEKLVHH LSDENRSWGA PKWSDITDSH 420 SAGNEKKSSR GSKWSDRDAA PEEKSNVWGN DNVGEKIGVV DPRSKERSFN SQQSHLDNAS 480 RTWGGPSRND KPIDFTLHKS PQWISDNSGG SMGFEEPKAS GKFLASESMI STRDIEQYSL 540 SINDSRGHNQ DSQSHITNEM SIKIGKPDVT QEVSAQPLSS FNMNTQSQTV LPTQPFNLNG 600 GTQQQSSNPY SRTHPQHVEP IKKSDLVDPR LTLQQVTSGT SMTQNISTNE TVAQLTNLSA 660 SLAQIFGNGQ HLPQLYAALN PSTSGLVSSH PIEPTQVIAP QPLIHLNQTT HCEKQYDPIN 720 DSIDQTDLAG GGSQSPMKSI LPSSTAADPS GGDPPKISSL EENVNASNEL KQPEKVMDKK 780 EETVQMDADG DGDGDNQGDE EGKKSKDPKG MRMFKFALVQ FVKEILKPTW KEGQMSKEAH 840 KTIVKKVVDK VTSTIQAAQI PQTQEKTDQY LSYSKPKLTK LVQAYVEKHS KT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33835.1 | 1e-14 | C3H family protein |