PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026406153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | TCP | ||||||||
Protein Properties | Length: 308aa MW: 35178.8 Da PI: 10.6225 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 135.6 | 4.3e-42 | 140 | 293 | 2 | 133 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssaseceaessss 80 +gkkdrhski T++g+R RR+Rls+++a++fFdLq++LG+dk+skt+eWLl+++kpaike+++ + s+ase XP_026406153.1 140 PGKKDRHSKIVTAQGPRNRRMRLSVDIARKFFDLQEMLGVDKASKTLEWLLNKSKPAIKEIMKIstirksvndggsakesNISTASEIL------ 228 79**************************************************************5555555544433332222222222...... PP TCP 81 sasnsssg...................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 + ++ +++k+ ++q+ +a+++ la+e r +arararert +k +++ XP_026406153.1 229 -------SetermapahqnrtfpekkpSKHGNKEKQIRQQSCKATFQPLARELRVNARARARERTIQKRMNQ 293 .......03333333444455887655444444466677777778889999**************9999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MDIQDKFIEN DNLNLHFKQQ QHQDLSFSFF PFSPTLFDND DYGFFPHHHH DLLVSHCWPV 60 NNPSTASTAT ESVAAHQHQL DLLAAVTNNK AEVSLNDIKN DDGFAISILD PSNKVISDSK 120 INNITTKNTS TKRSSRERSP GKKDRHSKIV TAQGPRNRRM RLSVDIARKF FDLQEMLGVD 180 KASKTLEWLL NKSKPAIKEI MKISTIRKSV NDGGSAKESN ISTASEILSE TERMAPAHQN 240 RTFPEKKPSK HGNKEKQIRQ QSCKATFQPL ARELRVNARA RARERTIQKR MNQRLQELKK 300 CIQGKTQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 8e-27 | TCP family protein |