PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405539.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TALE

Protein Properties

Length: 556aa MW: 62438.2 Da PI: 5.4614

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.8	3.7e-08	481	519	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ L+ + gLt +qV++WF N R + XP_026405539.1 481 MFQNflHPYPNDAEKHLLSIRSGLTRSQVSNWFINARVR 519 5887779******************************88 PP
2	BELL	78.5	9.1e-26	353	423	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er+e++++k kLl+ll+ Vd++Y+ ++++++tvis+F a+++l++ ++Yt++ l+++S +++L+d+ia+qi XP_026405539.1 353 ERREVESRKDKLLNLLQLVDRKYNECMDEIHTVISAFRAATELDA-QIYTRFTLHTVSSAYKNLRDRIANQI 423 799***************************************8.***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MDDGRVNFPG YTDPNSLLID GIMSNISSLV QTDTMDFNSL SQMMDRYSSV SALQGEPTCN 60 LRIDNFGAIS DPNIPLSRNT IGISNRDPPE QIFRGTALTD ASYATSSNGQ EILNGVSISS 120 SSGMDSGDLS SVVSNNRGIG TSQLPCNAYM NFGHNLVRSD PEFLAQENDL SWPRQLDSRW 180 EFDNHSMRNS YTTGWNSQET SNSGVDQHPY NYHMPTNHVS RTTFEPSTID VPNIPDWSSE 240 MNCSGSFREI GCSDQTCRLE EPSLDAGTHR PVSVSQESSS GSDYLQVLQQ ILADVASFSL 300 GGFENGKTSS ERSNMGAKTS GSSNCHTEKG KKGMFPYPPV ESSCRDQPIV TLERREVESR 360 KDKLLNLLQL VDRKYNECMD EIHTVISAFR AATELDAQIY TRFTLHTVSS AYKNLRDRIA 420 NQILINQDCL SRQSVKEDPS LESSFIQNQW ALQQLKRKGH HLWRPQRGLP EKSVSVLRAW 480 MFQNFLHPYP NDAEKHLLSI RSGLTRSQVS NWFINARVRL WKPMIEAMHG EINSRKICSI 540 EDEINSDDQS WSNISH

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MDDGRVNFPG YTDPNSLLID GIMSNISSLV QTDTMDFNSL SQMMDRYSSV SALQGEPTCN  60
LRIDNFGAIS DPNIPLSRNT IGISNRDPPE QIFRGTALTD ASYATSSNGQ EILNGVSISS  120
SSGMDSGDLS SVVSNNRGIG TSQLPCNAYM NFGHNLVRSD PEFLAQENDL SWPRQLDSRW  180
EFDNHSMRNS YTTGWNSQET SNSGVDQHPY NYHMPTNHVS RTTFEPSTID VPNIPDWSSE  240
MNCSGSFREI GCSDQTCRLE EPSLDAGTHR PVSVSQESSS GSDYLQVLQQ ILADVASFSL  300
GGFENGKTSS ERSNMGAKTS GSSNCHTEKG KKGMFPYPPV ESSCRDQPIV TLERREVESR  360
KDKLLNLLQL VDRKYNECMD EIHTVISAFR AATELDAQIY TRFTLHTVSS AYKNLRDRIA  420
NQILINQDCL SRQSVKEDPS LESSFIQNQW ALQQLKRKGH HLWRPQRGLP EKSVSVLRAW  480
MFQNFLHPYP NDAEKHLLSI RSGLTRSQVS NWFINARVRL WKPMIEAMHG EINSRKICSI  540
EDEINSDDQS WSNISH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	3e-85	TALE family protein