PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026405515.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 423aa    MW: 47749.3 Da    PI: 4.2223
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026405515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH222.9e-07193234753
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                     + Er RR+r+N+ + +Lr+++P+      +K++K ++L  A  Y+++
  XP_026405515.1 193 KSERYRRKRLNQQYLTLRSIVPNI-----TKMDKRTVLVDALAYLQD 234
                     67*********************7.....6**************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MDELFEELVG YLMQKEEANI QENTNHEDHN SIPGGIADDN MMPVAMMDSF NINVDYERDG  60
DCYNPHMDLQ CNVDDYDYQL GALLYDECLA DLPLLNAKIT GNFQEGCVSG NPSDDRIQCD  120
RLLPDVTDTS LENCDIDPYF NLMETSTMQQ KTDGDVCCDP HQPQSPSPSI PDHEPQQVED  180
IGDDVDTSSK NLKSERYRRK RLNQQYLTLR SIVPNITKMD KRTVLVDALA YLQDILHQTQ  240
IEIENQNKVI SSLNSSLGNE ETINLPLHHH NEDVVSAVEE NAVDVSGNDG QVQPLFHTLL  300
VEPVVPPGPP PFERRAIFPA IMQMEVEKLD EERYVLRIVF NEASGTMGLV QRSVEMLKGF  360
ESINVALSAY GQHHVQSSNF LRVKKIKGSL LQTNEEDLLN RAKESVKQLG HLFLPFVSST  420
DNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-14bHLH family protein