PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405171.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 797aa MW: 90881.4 Da PI: 5.0809

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.1	9.7e-31	70	165	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+r++++ + + k+rr r+ tr gCka+++v++++ gkw+v+kle+ HnHel XP_026405171.1 70 NFYNSYAKQMGFSIRVNSYYRSKKDNSIISREFCCSKEGFRRDKRARkmdssdDAKRRRARPITREGCKAMMTVRRRDCGKWYVAKLEKTHNHEL 164 6**************************************999888899999999999*********************************9 PP FAR1 90 a 90 + XP_026405171.1 165 V 165 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MEKLSVELEK DMMDYVALED DTEECCVIED VEVPMVLDDT NKDDLSTCLA GGITEPTTDL 60 EFVSEDDARN FYNSYAKQMG FSIRVNSYYR SKKDNSIISR EFCCSKEGFR RDKRARKMDS 120 SDDAKRRRAR PITREGCKAM MTVRRRDCGK WYVAKLEKTH NHELVTPAMR HFLRSHRLEN 180 EPQKSLSSNY ESPEISTKST GNLFTEECGV INKNGFPTQG ETNFIGKGRL STFGLDAQSL 240 LGFFKIMKAN DPAFFYAIQV DDEDRLSSVF WVDTRSRISY NCFSDVVAFD STYQVNQYKM 300 PFAPFTGVNH HKQSILFGCA LLADESESTF IWLFKTWLEA MSGRQPGLII TDNDITIRTA 360 VERVFPESCH RYCKWHILSK MPREMGQVYS ALPKAFQTEL DKCVNKSETG EEFELAWGSL 420 LDKYSLLGNE WLQSLYADCK LWAPAYLRDI FFAGMSATQR SESVNSLFDG YVNARTTIQD 480 FAEQYEKALN DRFEKEAREE FDTFYTKPVL KTPLPMEKQA ADIYTRKIFT VFQVEIFESL 540 VLAVKKSVDD GAITTYEVAR FDEERKAYFV AFNESEQVAS CCCKMFESEG ILCRHILAVF 600 RATNMFVLPS HYILKRWTRN AKDEAVSDLL PRVESQSDSH KAKNMQYNVL YQEAIKCAEE 660 GVASDHSFKV AFNALREARY KILNAKKNAF DASKVVTVVN TNDQIGNMLD CQIDSSAYPT 720 TSPSLQQDNT EDSPTSNSNY KFVPEQPASS IATKCRSPGL DSCPCLWPKD TDPNSVTTDQ 780 ELEPIASHGV LESIPQS

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MEKLSVELEK DMMDYVALED DTEECCVIED VEVPMVLDDT NKDDLSTCLA GGITEPTTDL  60
EFVSEDDARN FYNSYAKQMG FSIRVNSYYR SKKDNSIISR EFCCSKEGFR RDKRARKMDS  120
SDDAKRRRAR PITREGCKAM MTVRRRDCGK WYVAKLEKTH NHELVTPAMR HFLRSHRLEN  180
EPQKSLSSNY ESPEISTKST GNLFTEECGV INKNGFPTQG ETNFIGKGRL STFGLDAQSL  240
LGFFKIMKAN DPAFFYAIQV DDEDRLSSVF WVDTRSRISY NCFSDVVAFD STYQVNQYKM  300
PFAPFTGVNH HKQSILFGCA LLADESESTF IWLFKTWLEA MSGRQPGLII TDNDITIRTA  360
VERVFPESCH RYCKWHILSK MPREMGQVYS ALPKAFQTEL DKCVNKSETG EEFELAWGSL  420
LDKYSLLGNE WLQSLYADCK LWAPAYLRDI FFAGMSATQR SESVNSLFDG YVNARTTIQD  480
FAEQYEKALN DRFEKEAREE FDTFYTKPVL KTPLPMEKQA ADIYTRKIFT VFQVEIFESL  540
VLAVKKSVDD GAITTYEVAR FDEERKAYFV AFNESEQVAS CCCKMFESEG ILCRHILAVF  600
RATNMFVLPS HYILKRWTRN AKDEAVSDLL PRVESQSDSH KAKNMQYNVL YQEAIKCAEE  660
GVASDHSFKV AFNALREARY KILNAKKNAF DASKVVTVVN TNDQIGNMLD CQIDSSAYPT  720
TSPSLQQDNT EDSPTSNSNY KFVPEQPASS IATKCRSPGL DSCPCLWPKD TDPNSVTTDQ  780
ELEPIASHGV LESIPQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein