PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405038.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 606aa MW: 69946.7 Da PI: 7.6579

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.3	2.6e-18	45	130	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +f+++Y++++GF v+k+++kks +g tf+C + gk e+++++ + +++++gCk kl+ ++ ++kw++++++leHnH l+p XP_026405038.1 45 EFFRSYGYHMGFPVKKRTTKKS-IDGILRYVTFTCGRAGKGESSSNN----LVKPPTSQVGCKVKLTASLCGENKWRINTVNLEHNHGLCP 130 69*************99998.9999************9988....77889999****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MDEETSNKET TGVGDAEVVI DEKRESEIIE PKVGTMFNSV DEIYEFFRSY GYHMGFPVKK 60 RTTKKSIDGI LRYVTFTCGR AGKGESSSNN LVKPPTSQVG CKVKLTASLC GENKWRINTV 120 NLEHNHGLCP SQAAYFRCNW QFGKNNKMNP EGGSDRGVNE NVLNVERECR RCSGTMTRLQ 180 LGEGDAFAMQ EFFMKMQTRS KDFFCSMDLD EDGRLRNVFW ADGRSREAYK EFGEVVYLDT 240 SFLANKYNIQ LTSLVGVNHH GNLTLFGCGL VSSDDTGTYV WLFRTWLECM SNCAPKGIIT 300 DQDTAIKIAV EVVFPTIRHR WCLYRVMKKM PEKLGELYGS ISSSLQEVVY DTQSPTEFEQ 360 SWNELVEKHG LRHDEWLTGL YNGRDRWVPC FVKSNFWAGI SATKRDDSIN LFFDGFVNSK 420 TTLKKFFVEQ YDKALKSEVE KKSQLDFRSF AKTVPCITTY EMEKQVQRVY TISKFKEFQK 480 ELTGKMYCDV KSIQEGSMVS EYHIREDIVI GEAKKRMMST ISFQRNDCEV NCSCLMFQFG 540 GILCRHAIYV LIRNDIMLLP DSYILSRWRK DVRRYYTRVK INDSWSATPE QLQYDELCLA 600 FAKLAH

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MDEETSNKET TGVGDAEVVI DEKRESEIIE PKVGTMFNSV DEIYEFFRSY GYHMGFPVKK  60
RTTKKSIDGI LRYVTFTCGR AGKGESSSNN LVKPPTSQVG CKVKLTASLC GENKWRINTV  120
NLEHNHGLCP SQAAYFRCNW QFGKNNKMNP EGGSDRGVNE NVLNVERECR RCSGTMTRLQ  180
LGEGDAFAMQ EFFMKMQTRS KDFFCSMDLD EDGRLRNVFW ADGRSREAYK EFGEVVYLDT  240
SFLANKYNIQ LTSLVGVNHH GNLTLFGCGL VSSDDTGTYV WLFRTWLECM SNCAPKGIIT  300
DQDTAIKIAV EVVFPTIRHR WCLYRVMKKM PEKLGELYGS ISSSLQEVVY DTQSPTEFEQ  360
SWNELVEKHG LRHDEWLTGL YNGRDRWVPC FVKSNFWAGI SATKRDDSIN LFFDGFVNSK  420
TTLKKFFVEQ YDKALKSEVE KKSQLDFRSF AKTVPCITTY EMEKQVQRVY TISKFKEFQK  480
ELTGKMYCDV KSIQEGSMVS EYHIREDIVI GEAKKRMMST ISFQRNDCEV NCSCLMFQFG  540
GILCRHAIYV LIRNDIMLLP DSYILSRWRK DVRRYYTRVK INDSWSATPE QLQYDELCLA  600
FAKLAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-99	FAR1 family protein