PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026404943.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARR-B | ||||||||
Protein Properties | Length: 714aa MW: 78642 Da PI: 6.0506 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.2 | 3.7e-28 | 216 | 269 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026404943.1 216 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVDRLTRENVASHLQKYRL 269 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 37.9 | 4.1e-12 | 218 | 268 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++t++++ s++qky+ XP_026404943.1 218 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvDRLTRENVASHLQKYR 268 678***********************************************7 PP | |||||||
3 | Response_reg | 76.6 | 9e-26 | 32 | 140 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ + +++l+++l++ +y +v++++++ al++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++a+g+ + + + G XP_026404943.1 32 VLAVDDDLICLRVLESLLRRCQY-HVTTTTQAVTALKMLRENRdkFDLVISDVQMPDMDGFKLLELVGL-EMDLPVIMLSANGDTRNVMRGITHG 124 799********************.***************999889*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_026404943.1 125 ACDYLLKPVRIEELKN 140 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 714 aa Download sequence |
MTVEEEFVRR RSSSILCEDE QKNDLFPIGM RVLAVDDDLI CLRVLESLLR RCQYHVTTTT 60 QAVTALKMLR ENRDKFDLVI SDVQMPDMDG FKLLELVGLE MDLPVIMLSA NGDTRNVMRG 120 ITHGACDYLL KPVRIEELKN IWQHVLRKKK VDPKDQNNLD NSDKLDSGMG DSGKGPENFG 180 NDDRTKLNRK RKDQNEEDDD ECDDDDENDD PSSQKKPRVV WSVELHRKFV AAVNQLGIDK 240 AVPKKILDLM NVDRLTRENV ASHLQKYRLY LKRISCVASQ QANMVAALGG KDASYLRMGS 300 LDGLGDFHGF AGPGQLSNGS LASYSSAGML GRSNAPLGLG LRGPSSGMMQ LGRPQNLTNS 360 VHDLGKLHQN GNFLQGMPMS LELDQLQKSR SISRIGEFSS SIDSTAFSGP SNFSETGVTI 420 GNSNNSFLNV HSNSLLLQGV PQQTQNRVGF GNQSSRRMPS VNSESFEFEF GASSHLPDQS 480 GCNDNWPSAA ALNGFPSNPL PLGENPFSHL DLSSGSLREN MSSINPSIGS NSFDVSSNSV 540 TTLHESRRDL QAGPIGVNVQ HDKFSNFVNL GDNVGQSMNL VPKHKWISHK QDYSQNSNLL 600 FSSSNPSVPI HGVVGALGQN NNTMSNRKTD FISTSRPNSG STPHLTRQNG IEKLSLDMTE 660 NFLLDQNKSH GGVVSNSCDS LEDLMSAMIK RERDELTSRD GDIGCDIFPV RTCM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-128 | ARR-B family protein |