PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404448.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 286aa MW: 30768.2 Da PI: 7.089

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.7	1.1e-12	12	56	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT eEd+ + +a+ + + +W++Ia+ ++ gRt++++k+++ XP_026404448.1 12 EWTREEDKAFEKAIISNPEDsidRWEKIAEALP-GRTAEEIKNHYE 56 7******************************.********96 PP
2	Myb_DNA-binding	40.5	6.4e-13	124	168	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky XP_026404448.1 124 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKY 168 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MTADENMNSC SEWTREEDKA FEKAIISNPE DSIDRWEKIA EALPGRTAEE IKNHYELLVE 60 DVNNIEAGLV TLPNYISASE GSTEHASEGG TSKKGGIHLA HFQSESNHGS KSSRADQERR 120 KGIAWTEDEH RLFLLGLDKY GKGDWRSISR NFVVSRTPTQ VASHAQKYFI RLNSMNKDRR 180 RSSIHDITSV GSGDVSSPQG PITGQTNGAT PGGGSSSKST KPQAQPSSGA PAVGVYGAPT 240 IGQPVGGPLI PAVGTPVNLS APPHMAYGIR APVPSMPPMT YPMPHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-108	MYB family protein