PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404424.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 306aa MW: 32885.3 Da PI: 9.1763

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.7	1.4e-36	46	168	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg..... 88 a+kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ s+ +sn ss XP_026404424.1 46 AVKKPPAKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSavsL----SVRSSNTSSMsssld 136 789*************************************************************999997774331....222222222222344 PP TCP 89 ...............................k 89 + XP_026404424.1 137 qkpininhnnqilnptpfllgkrirlddnnnN 168 44555666666666666666655555544431 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MATTDGIGHG GVLIDPSSRQ QQQQQQLQQQ QTGTNTTSGT NNGVLAVKKP PAKDRHSKVD 60 GRGRRIRMPI VCAARVFQLT RELGHKSDGQ TIEWLLRQAE PSIIAATGTG TTPASFSAVS 120 LSVRSSNTSS MSSSLDQKPI NINHNNQILN PTPFLLGKRI RLDDNNNNDI ENHNHNHGDD 180 HDKNDNSNGG VSVTTAMAAA AGGGFWAVPA RPDYGQVWSF SATPDMVLPT PAALMASQPF 240 MSAARFSQQH QQHQQQQQQQ MNEAAASGVR LGNYFPVGPV TQGHLNLLAS MSTQPASSGG 300 RDDEPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	9e-43	TCP family protein