PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404391.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 1078aa MW: 120484 Da PI: 8.1266

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	122.1	2.5e-38	163	240	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+ +ls+ak+yhrrhkvCe+hsk++++lv +++qrfCqqCsrfh l +fD++krsCrrrLa+hn+rrrk+q+ XP_026404391.1 163 MCQVDDCRGNLSQAKDYHRRHKVCEIHSKTTKALVGKQMQRFCQQCSRFHPLLDFDDGKRSCRRRLAGHNRRRRKTQQ 240 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1078 aa Download sequence
MEQVEAQISL PVFMQRHHPV QAACFNQEPP PMSRKRELSL NTSNWPQQHP PQFQQQQYGL 60 PNSEKNWNCN VWMWDSVKFV AKPLEADVTR NRSSAAVGAA AVTNQRRKGE ENSKSSMNQD 120 DRENLALNLG GSLYYVDEHV SRPNKRIRSG SPGGVNGSAS YPMCQVDDCR GNLSQAKDYH 180 RRHKVCEIHS KTTKALVGKQ MQRFCQQCSR FHPLLDFDDG KRSCRRRLAG HNRRRRKTQQ 240 EDVSSRLLVP GKLENNGSGN SEIVNIIQAL ARLQGTSTDR NANISSIPDR DWLIRILNKM 300 NSLPVAANNA ARLALHGGFD LNVSQEVSTE SSNKVNENFS ASSTMDLLAI FSAALKECSP 360 EVLAVLSQTS SPNDDDKLSY HKNSSPVSTL AGGDGSATFQ SRLDPSSCQV QECRPGFPLQ 420 LFGSSSDSDS PPNQGSPWKY YSSDSSNPIE ERSPAFSSPG TTLLFPLRAP SSEIMKHESI 480 SITGENNIED TPPGGSTLLE LFKHDSGRVA ISSVRSPSGR PGYTSQSGSD QSPTSSSDSH 540 DRTGRIIFKL FDKDPSNLPG NLRAEIINWL SHSPSDIESY IRPGCVILSI YTVAPSRTWE 600 QFQQNLLQRV KLLVNEQNSD FWRNGRFLIH TGRQLASHKD GNFRLCKAWR TQNSPELMFV 660 SPLAVVGGQQ TTLLLRGRNL RVPGTKIHCA YMGGYTSKEV TGSAGTIYDR TSAESFNFSS 720 EIPNVLGRCF IEVENGFKGN SFPLIIADSS ICQELRLLEP ELEIHASVSD GTAEQQNLDS 780 ERLRSREDIL HFLHELGWLF QRKNIPSSFD GLDFSHGRFK FLFIFSIERD WCALVKMLLD 840 ILVERNMKEG ALSWESLENL SEIHLLHRAV KRKCRSMVDL LIKYSLTSTT GAPETYLFSP 900 SQMGPGGLTP LHLAACLHDS KEMVDILTED PQKVGIDSWY SLYDANGQSP YDYASMRNNH 960 YYNRMVDRKV AVRKQGQVSI DIEDNEISSS HQQQQQQPQP QLQLVQGRRR PCSRCAVMPP 1020 TRRFMRMPGT QGLLHVPYVH SMLAIAAMCV CVCLLMRGSP QIGDIPPFMW AHLGSGIM

Sequence ? help Back to Top

Protein Sequence Length: 1078 aa Download sequence

MEQVEAQISL PVFMQRHHPV QAACFNQEPP PMSRKRELSL NTSNWPQQHP PQFQQQQYGL  60
PNSEKNWNCN VWMWDSVKFV AKPLEADVTR NRSSAAVGAA AVTNQRRKGE ENSKSSMNQD  120
DRENLALNLG GSLYYVDEHV SRPNKRIRSG SPGGVNGSAS YPMCQVDDCR GNLSQAKDYH  180
RRHKVCEIHS KTTKALVGKQ MQRFCQQCSR FHPLLDFDDG KRSCRRRLAG HNRRRRKTQQ  240
EDVSSRLLVP GKLENNGSGN SEIVNIIQAL ARLQGTSTDR NANISSIPDR DWLIRILNKM  300
NSLPVAANNA ARLALHGGFD LNVSQEVSTE SSNKVNENFS ASSTMDLLAI FSAALKECSP  360
EVLAVLSQTS SPNDDDKLSY HKNSSPVSTL AGGDGSATFQ SRLDPSSCQV QECRPGFPLQ  420
LFGSSSDSDS PPNQGSPWKY YSSDSSNPIE ERSPAFSSPG TTLLFPLRAP SSEIMKHESI  480
SITGENNIED TPPGGSTLLE LFKHDSGRVA ISSVRSPSGR PGYTSQSGSD QSPTSSSDSH  540
DRTGRIIFKL FDKDPSNLPG NLRAEIINWL SHSPSDIESY IRPGCVILSI YTVAPSRTWE  600
QFQQNLLQRV KLLVNEQNSD FWRNGRFLIH TGRQLASHKD GNFRLCKAWR TQNSPELMFV  660
SPLAVVGGQQ TTLLLRGRNL RVPGTKIHCA YMGGYTSKEV TGSAGTIYDR TSAESFNFSS  720
EIPNVLGRCF IEVENGFKGN SFPLIIADSS ICQELRLLEP ELEIHASVSD GTAEQQNLDS  780
ERLRSREDIL HFLHELGWLF QRKNIPSSFD GLDFSHGRFK FLFIFSIERD WCALVKMLLD  840
ILVERNMKEG ALSWESLENL SEIHLLHRAV KRKCRSMVDL LIKYSLTSTT GAPETYLFSP  900
SQMGPGGLTP LHLAACLHDS KEMVDILTED PQKVGIDSWY SLYDANGQSP YDYASMRNNH  960
YYNRMVDRKV AVRKQGQVSI DIEDNEISSS HQQQQQQPQP QLQLVQGRRR PCSRCAVMPP  1020
TRRFMRMPGT QGLLHVPYVH SMLAIAAMCV CVCLLMRGSP QIGDIPPFMW AHLGSGIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein