PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026404231.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 302aa MW: 33076.8 Da PI: 6.7043 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 52.6 | 6.1e-17 | 224 | 260 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cgt+ Tp++Rrgp+g++tLCnaCGl+++ kg+ XP_026404231.1 224 CRHCGTSGkqTPMMRRGPEGPRTLCNACGLMWANKGT 260 *******999************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 302 aa Download sequence |
MQQLPGQINE VHITDESLSD SQSLHHVHYM QQNHAHIVNH ENNNGNGGSV MEEDDDGAGS 60 DGMEAEVPTG HLADMHGTTM TRNGIGGHGN QLTLSFQGEV YVFDSVSPEK VQAVLLLLGG 120 REVPTTVTAI PTAPPHNNRG LNEIPPRLNV PQRMASLIRF REKRKERNFD KKIRYTVRKE 180 VALRMQRHKG QFTSSKNIQD ESGSAITTWD SGRWGENGQQ EATCRHCGTS GKQTPMMRRG 240 PEGPRTLCNA CGLMWANKGT LRDLTKAGTG LPVQNTPPLN STEENKAAEV LETPEASGSE 300 SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G21175.2 | 9e-94 | GATA family protein |