PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403726.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 605aa MW: 67474.9 Da PI: 7.5911

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	443	489	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq XP_026403726.1 443 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITELQ 489 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MLRMKTEIEM DSGGAGIWSD EDKAMVIAVM GSRAFEYLTT SSVSSEGLLT TVGRDENLQN 60 KLSELVENPN SSSFSWNYAI FWQISRSKSG DLVLGWGDGY CREPKEGEAP GANPFLNLRL 120 ESESQQKMRK TVLQKLHRFF GGSDEDNYAQ GLDQVTDTEM FFLASMYFSF PSGQGAPGKA 180 LRSGNHIWLS DSLKSPSDYC VRSFLSRSAG IQTTVLIPTD SGVIELGSVR SIPENSKMLQ 240 LIRCMFTSNS AIRVKPITVV PMMNEKKDEN GCHSNFAFRG RQDEYPKIFG QDLNLGRSQI 300 IDKPIVEKVE ERPWDVYQNG NGVSFQNNRK GGFRGMNWPQ LRGMKPGTAT NSYSSQAPVN 360 NQQKLGNSIL VMEDHRLNQI QSQNKQLPKH IDFSVGATSR GSLVTRPVEL EPADADEQSG 420 PADERRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLGD 480 AITYITELQA KLKEMESEKE KLGTTSKEVA NSEANSAADN RSRSPDIDIQ AVHDDFVVRV 540 SCPLDTHPVS RVVQAFKDSQ VTVLESKFSI GNDTVFHTFV VKSQGSEQLT KEKLMAAFSR 600 DGSTL

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MLRMKTEIEM DSGGAGIWSD EDKAMVIAVM GSRAFEYLTT SSVSSEGLLT TVGRDENLQN  60
KLSELVENPN SSSFSWNYAI FWQISRSKSG DLVLGWGDGY CREPKEGEAP GANPFLNLRL  120
ESESQQKMRK TVLQKLHRFF GGSDEDNYAQ GLDQVTDTEM FFLASMYFSF PSGQGAPGKA  180
LRSGNHIWLS DSLKSPSDYC VRSFLSRSAG IQTTVLIPTD SGVIELGSVR SIPENSKMLQ  240
LIRCMFTSNS AIRVKPITVV PMMNEKKDEN GCHSNFAFRG RQDEYPKIFG QDLNLGRSQI  300
IDKPIVEKVE ERPWDVYQNG NGVSFQNNRK GGFRGMNWPQ LRGMKPGTAT NSYSSQAPVN  360
NQQKLGNSIL VMEDHRLNQI QSQNKQLPKH IDFSVGATSR GSLVTRPVEL EPADADEQSG  420
PADERRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLGD  480
AITYITELQA KLKEMESEKE KLGTTSKEVA NSEANSAADN RSRSPDIDIQ AVHDDFVVRV  540
SCPLDTHPVS RVVQAFKDSQ VTVLESKFSI GNDTVFHTFV VKSQGSEQLT KEKLMAAFSR  600
DGSTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	425	433	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-173	bHLH family protein