PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026403605.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 221aa    MW: 25459.7 Da    PI: 6.2362
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026403605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.74.1e-08130170954
                     HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P  a      K++ a++L +Av+Y+k L
  XP_026403605.1 130 ARHRRERISERMRILQRLVPGgA------KMDTASMLDEAVRYVKFL 170
                     699*****************966......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MASMEQPTPI STPYLHDDQL ACDVIFENFH SQQITQPTSS SCSSHYAPIH SDHHEHQQQQ  60
LIRTLSYCSE EKKQEKCEKG SEEEEEELDA MKEMMYKIAA MQPIDIDPAT LSKPKRRNVR  120
ISNDPQSVAA RHRRERISER MRILQRLVPG GAKMDTASML DEAVRYVKFL KKQVIKLQSS  180
NQNSPRLAVP IINDDYRWHV PSSENNIVTF TETAEDYCIP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.12e-36bHLH family protein