PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026403554.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HB-PHD
Protein Properties Length: 740aa    MW: 84511.3 Da    PI: 10.0127
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026403554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.42.7e-09513559753
                     --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                     + ++ +e+L ++F+++  p ++ +e  +k+lg+  ++++ WF+N R+
  XP_026403554.1 513 IPPDAVEVLRKVFAETELPPKDVKENVSKQLGIASEKISKWFKNTRY 559
                     457899***************************************97 PP

2PHD32.81.6e-11227282151
                     SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
             PHD   1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                     +C+ C+   +  +++++lCd +C+ +fH+kCl+++l ++++p +   w+C+ C++k
  XP_026403554.1 227 ICAKCKLreAFPDNDIILCDgTCDCAFHQKCLDPPLATQNIPPDdqGWFCKFCECK 282
                     588898854455********56*******************99999*******985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 740 aa     Download sequence    
MESTRRKVRR QVSGKTRRDV ASKMAISADD GGTRYYDKVY NPNRRSQART IGSILSKKKR  60
RGSKISNNGS RKKPQIRRKV MQKFSDTDSS DKPLSSIFRR RKSSTSRRDT DGNLGNQKYA  120
RRRKRNRMKE NREQDETVRL QRRTKYLIIK MKLEQNLIDA YSGEGWNGQS REKIKPEREL  180
QRAKKQILKC KLGIRDAIHQ LHLLGSKGCI EQSALAPDGS VFHEHIICAK CKLREAFPDN  240
DIILCDGTCD CAFHQKCLDP PLATQNIPPD DQGWFCKFCE CKMEIIEAVN AHLGTHFSTS  300
SNWQDVFEEA AVEPDENASL NPEDEWPSDE SDDDDYDPER NEMSCSINGM GTKDDKADEA  360
SSSSSFLWTS DEEANLQSRS LLENDGSPEG GFYQSKHRGK NSDKINLSKM IDNKISDGST  420
DLEIRSRRRQ RRDVDYRKLH DEMFGKDLVE NEQVSEDEDW GPCRQRRRLN GSDIAGTLVS  480
LFGDEDKHSD GNPTKPKKKL RRVPDEKRTL FRIPPDAVEV LRKVFAETEL PPKDVKENVS  540
KQLGIASEKI SKWFKNTRYM ALKIRKEANE SNAAAGSNRT TDLAASKAKA SLLSSDNEEA  600
KLTKFSGNGR RRKNMESLTI SPAKRRRRSR TAGAWPTSIN EVNTLLNSPS RFKKKSTINL  660
KREQVVEDNI IPKYEQLNST KIELLYSAEM ERLCSLQAKL EEMKKVLIGI HKGRSTATKE  720
TNHAEQLVVY VPVAEVRVKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15761KKKRR
25783KKKRRGSKISNNGSRKKPQIRRKVMQK
35884KKKRRGSKISNNGSRKKPQIRRKVMQK
4122152RRKRNRMKENREQDETVRLQRRTKYLIIKMK
5495501KPKKKLR
6610628RRRKNMESLTISPAKRRRR
7611629RRRKNMESLTISPAKRRRR
8625655RRKRNRMKENREQDETVRLQRRTKYLIIKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.11e-128HB-PHD family protein