PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026403286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | Nin-like | ||||||||
Protein Properties | Length: 188aa MW: 21891.4 Da PI: 10.7825 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 85.3 | 5.5e-27 | 66 | 115 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i l dl+kyF+lpi++A+++L+v+lTvLKr+CR++GI+RWPhRkiksl XP_026403286.1 66 ARIALADLAKYFDLPIAEASRNLKVGLTVLKRKCRELGIPRWPHRKIKSL 115 7899********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MDMAEESKDK FHHSARVLAM LGQDLNCLPH PITESRMPEN LQQSDKLESD AVVKNNKKRA 60 ATDHIARIAL ADLAKYFDLP IAEASRNLKV GLTVLKRKCR ELGIPRWPHR KIKSLDTLIR 120 NLQEEATRQE RENKAAAAMA VTKRQKMLER EKQGIESKPF MEIQNETKRF RQDVFKRRHR 180 ARVVNKRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 2e-58 | Nin-like family protein |