PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403155.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Nin-like

Protein Properties

Length: 968aa MW: 106736 Da PI: 6.4517

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.3	7.2e-29	638	688	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ XP_026403155.1 638 EKTISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 688 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 968 aa Download sequence
MDDGRFPQDT MSAALSSDPS VDFDLMEALL SGGCWLETTD GSAADFLQPS SSNFYNSSYF 60 LAPPTSTSES LNPNYRQSNN QEDTDGSILP TRNSISLAPQ SDTSFTVRYP NQNTFRSSEF 120 SGQSDGYPAE GSSQLSRRWW DGPVPHSGTL ASVKDRLNSA LAYLKNSLRE GDVLIQIWVP 180 VKRGDRQFLV TEDQPFTTLD SNCQNLESYR KISMRFEFPA DENSKESVGL PGRVFLEKVP 240 EWTPNVQLFS IDEYPRIGHA QQHHVHGTVA LPIFERGSRA CLGVVEVVMT TQKINFASEL 300 DTVCRALEAV NLRGSKVESP PGPPPIVKDS QLPYHAVLPE ILEVLNAVCK THRLPLAQTW 360 VPCTVQAKEG CRHSDENYAN CVSTVDNACC VADTNIGGFH EACSDHHLFR GQGVAGRAFT 420 TNQPCFSNDI TTYSKKDYPL SHYAKMFRLQ AAVAIRLRSI YTGKVDYVLE FFLPVDCRDP 480 EEQKTMLSSL SIIIQQVCRT LRVVSDKEVE EESNLNTSEV VFPSAEGLKR EERTNLGPTT 540 SKGSSEEESS WISHMMEAQR KGKGVQKQEP AEGFKVTTHW DSSETVLQHG KTFGDLKQHR 600 QDSGPKDTAE SGGDSSFGEQ RRFSSAGKTG EKRRTKMEKT ISLQVLRQYF AGSLKDAAKS 660 IGVCPTTLKR ICRQHGITRW PSRKIKKVGH SLRKLQVVID SVQGAEGAFH IGSIYANFPD 720 LTSPNLSRTS PFSTPKPNDR SNPLNVQPEG APSPPAASKS PSSSCSQSSS SSLSSSSGKQ 780 QNSVIGSLAS IEDASMAETL GGDSCTLKRA RSEAGLYSAG ELHTTAQEDL GLFGRSQSQK 840 CLGTEHLVLD DCLPPLPSSH NHGASRDNKG GLRMKVTYGE EKVRFSLQPY WGYRDLQQEI 900 AKRFHIEDMS RVDLKYLDDD SEWVLLTCDA DLEECMDIYK SSHTQTIKLS VHHSSHPNLG 960 SSFGSNAP

Sequence ? help Back to Top

Protein Sequence Length: 968 aa Download sequence

MDDGRFPQDT MSAALSSDPS VDFDLMEALL SGGCWLETTD GSAADFLQPS SSNFYNSSYF  60
LAPPTSTSES LNPNYRQSNN QEDTDGSILP TRNSISLAPQ SDTSFTVRYP NQNTFRSSEF  120
SGQSDGYPAE GSSQLSRRWW DGPVPHSGTL ASVKDRLNSA LAYLKNSLRE GDVLIQIWVP  180
VKRGDRQFLV TEDQPFTTLD SNCQNLESYR KISMRFEFPA DENSKESVGL PGRVFLEKVP  240
EWTPNVQLFS IDEYPRIGHA QQHHVHGTVA LPIFERGSRA CLGVVEVVMT TQKINFASEL  300
DTVCRALEAV NLRGSKVESP PGPPPIVKDS QLPYHAVLPE ILEVLNAVCK THRLPLAQTW  360
VPCTVQAKEG CRHSDENYAN CVSTVDNACC VADTNIGGFH EACSDHHLFR GQGVAGRAFT  420
TNQPCFSNDI TTYSKKDYPL SHYAKMFRLQ AAVAIRLRSI YTGKVDYVLE FFLPVDCRDP  480
EEQKTMLSSL SIIIQQVCRT LRVVSDKEVE EESNLNTSEV VFPSAEGLKR EERTNLGPTT  540
SKGSSEEESS WISHMMEAQR KGKGVQKQEP AEGFKVTTHW DSSETVLQHG KTFGDLKQHR  600
QDSGPKDTAE SGGDSSFGEQ RRFSSAGKTG EKRRTKMEKT ISLQVLRQYF AGSLKDAAKS  660
IGVCPTTLKR ICRQHGITRW PSRKIKKVGH SLRKLQVVID SVQGAEGAFH IGSIYANFPD  720
LTSPNLSRTS PFSTPKPNDR SNPLNVQPEG APSPPAASKS PSSSCSQSSS SSLSSSSGKQ  780
QNSVIGSLAS IEDASMAETL GGDSCTLKRA RSEAGLYSAG ELHTTAQEDL GLFGRSQSQK  840
CLGTEHLVLD DCLPPLPSSH NHGASRDNKG GLRMKVTYGE EKVRFSLQPY WGYRDLQQEI  900
AKRFHIEDMS RVDLKYLDDD SEWVLLTCDA DLEECMDIYK SSHTQTIKLS VHHSSHPNLG  960
SSFGSNAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein