PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026403128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 838aa MW: 91677.6 Da PI: 5.612 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 24.8 | 3.8e-08 | 84 | 110 | 1 | 26 |
--S---SGGGGTS.--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartG.tCkyGdrCkFaHg 26 +kt+lC+f++r C++G++C++aH XP_026403128.1 84 WKTSLCSFYRRQDkDCSHGENCRYAHN 110 8*********9669************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 838 aa Download sequence |
MATTLPETAT SQSQTLIPSP TEIDTDTSIG GSLKSEEIRS TNGGDSVDKL TEKHSGNDDE 60 PQGDKRKREG EDEEGETKAR HPMWKTSLCS FYRRQDKDCS HGENCRYAHN EEELRPRPDN 120 SWDPTSERAK KIMKLENGDN IVGKDDVRED VFMPDALVDS LDPSLDKCLL NLPKKWISDD 180 LKSFMDELGV VYKTARKKIG MAVGFVGFET ADLVKAGIER MDGKAIGNRH VKVANVVPRT 240 FEKKAILTVP DSDDPDGPLS ITGSEDGNAV PRARTVRDAV TPLAHMSYSD QLEHKKNSLA 300 QTLKRLTRHA RKACSGGVTL PEWILKSKEI GGLPCKLEGI VESPLVKGYR NKCEFSVGLS 360 VQGKPTVGFM LGNFREGVTA VEEPVDCPNV SQISCKLASI FQGYLQHSAL PVWNRIDNTG 420 FWRQLTVREG RNPGPDYDIE NFEANISEVM VMVQVCTTGI DKEVLTKEFQ SMALAFSEGA 480 SASSPPLPLT SLVVQDHTGI SNVAPADAPL KPLSMLKAKS ASGEESESSV VEGIHDYIGN 540 LRFCISPTAF FQVNTLAAEK LYSLAGDWAG LGPDTLLFDV CCGTGTIGLT LAHRVGMVVG 600 IEMNASAVLD AKRNAEINNI KNCRFICSKA EDVMGSLLKE YIDVANEKEE PLRLSETNDS 660 GDASGQKESS LHGKVDLKSI SNETSEANNE SGCPQICQEE VKGRIQTICS SEDQNGRNGS 720 LMRQYKDVVA IVDPPRAGLH PTVIKALRTH PSLRRLVYIS CNPESLVANA IELCAPSTDK 780 SEKGNTNNRG WRNRSVAGQA RQRAKSMPTS EPYQPIKAMA VDLFPHTPHC ETVMLLER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28450.1 | 0.0 | C3H family protein |