PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026403066.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARF | ||||||||
Protein Properties | Length: 804aa MW: 88883.4 Da PI: 5.7033 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 75.2 | 7.5e-24 | 167 | 268 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + ++ XP_026403066.1 167 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVATDLHGVQWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGEN 258 99****************************963.3445679************************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_026403066.1 259 GELRLGIRRA 268 999****996 PP | |||||||
2 | Auxin_resp | 119 | 3.9e-39 | 293 | 375 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +a+a+st+s+F+v+++Pra ++eFv++++k++k+++++ +vGmRfkm+fe+ed +err+sG+v+gvsdldp+rW++SkWr+Lk XP_026403066.1 293 VANAVSTRSMFHVFHSPRANPAEFVIPYKKYLKSINHPAAVGMRFKMRFEMEDTAERRCSGLVTGVSDLDPYRWRDSKWRCLK 375 689******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 804 aa Download sequence |
MEFDLNHDMK EGDNIVSYHG DYDKDGVAGG GGCSLSSSSS CCSSNSASSS IYLELWHACA 60 GPLTSLPKKG SVVVYFPQGH LEQANFSPSL PCSENPSFGL QPQIFCRVVN VQLLANKEND 120 EVYTQLTLFP QPESGDIDLG GKGHEEEVGV EEEGVGDLPS KSTPHMFCKT LTASDTSTHG 180 GFSVPRRAAE DCFPPLDYKQ QRPSQELVAT DLHGVQWRFR HIYRGQPRRH LLTTGWSIFV 240 SQKNLVSGDA VLFLRGENGE LRLGIRRAGR PRNSIPNSIL GDQITNLNIL SPVANAVSTR 300 SMFHVFHSPR ANPAEFVIPY KKYLKSINHP AAVGMRFKMR FEMEDTAERR CSGLVTGVSD 360 LDPYRWRDSK WRCLKVMWDD DLVGDHFDRI SPWEIEPTSS APVLSIPSAP RLKKLRTLES 420 TSPDHPVSGG VEFLGFNESG RSSKVLQGQE NLGLRSPFYV GDGKNQVVDF AMPNSTNRSL 480 ASSGFQEIGI SDRFRAQPST FTGFSGSSRF QVLQGQEIFP SLSVHGRTDF NQIGSDKSNP 540 HSIMFNSYQR PYPNFYPLAS TDVRAMLMPY TDKFKENPDF MTNSQREPMQ SNLSSTQRSF 600 SGFSAMTGDE ICNSSNPNLV KEQRPVNSVS PPPVTETNLG SHSDELQDGT KVCKLFGFSL 660 TGEVPTSNSP NSSKRSCTKV HKQGNLVGRA VDLSRLDSYT DLLSELEKLF NMEGLLSNPE 720 KGWQIVYTDS ENDMMVVGDD PWHEFCSIVS KIHIYTQEEV EKMTIGMISD DTQSCLEEAP 780 PAVLDVSKSS SVGQLDSSPT ITTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60450.1 | 0.0 | ARF family protein |