PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026402996.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 349aa    MW: 38711.1 Da    PI: 5.946
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026402996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH543e-174493255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h++ E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eY++ Lq
  XP_026402996.1 44 RSKHSATEQRRRSKINDRFQILRDLIPQN----DQKRDKASFLLEVIEYVQFLQ 93
                    889*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MEVKSNRSLH EDEEDDDEEF VSRKGVSSQK GDGKSTDQKA NTPRSKHSAT EQRRRSKIND  60
RFQILRDLIP QNDQKRDKAS FLLEVIEYVQ FLQEKVQKYE GTYQGWNQEP VKLRPWRNAH  120
PHCDSMIDLS RTTRNGPGPS LMFSGKFDDN SMAVAPTMLT NTQNPVESDL TTSTAYKQVD  180
HHLGLANKAV QLPMPVQTNM LTTVASGGAL AQPQQGVITD VENVASQRQP QVWQSRPLPA  240
ECPIITDIVN EQEELDIEGG TINIAGVYSQ GLLNNLTQAL HSSGVDLSQA SISVQIDLGK  300
RAINRLNVSK AKDNEDPSAN RAMGNSRVGS SGEDSDQAQK RLKIEKPPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-75bHLH family protein