PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026402769.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARF | ||||||||
Protein Properties | Length: 830aa MW: 92543.6 Da PI: 6.1826 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.8 | 2.1e-23 | 120 | 221 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_026402769.1 120 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 210 99*****************************8544444..48************************************************..889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+++++r+ XP_026402769.1 211 KNQLLLGIRRA 221 9999****997 PP | |||||||
2 | Auxin_resp | 116.8 | 1.8e-38 | 246 | 329 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k+ ka+ ++vsvGmRf+m fete+ss rr++Gt++g+ dldp rWpnS+Wrs+k XP_026402769.1 246 AAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGIVDLDPARWPNSHWRSVK 329 79********************************87599******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 830 aa Download sequence |
MKLSSSSGLG QQSHEELWHA CAGPLVSLPT VGSRVVYFPQ GHSEQVAAST NKEVDGHIPN 60 YPNLPPQLIC QLHNVTMHAD VETDEVYAQM TLQPLTQQEQ KDTYLPADLG IPSKQPTNYF 120 CKTLTASDTS THGGFSVPRR AAEKVFPPLD FSQQPPAQEL IARDLHDVEW KFRHIFRGQP 180 KRHLLTTGWS VFVSAKRLVA GDSVLFIWNE KNQLLLGIRR ASRPQTVMPS SVLSSDSMHI 240 GLLAAAAHAA ATNSRFTIFY NPRASPSEFV IPLSKYAKAV FHTRVSVGMR FRMLFETEES 300 SVRRYMGTIT GIVDLDPARW PNSHWRSVKV GWDESTAGER QPRVSLWEIE PLTTFPMYPS 360 LFPLRLKRPW HPGVSSFNDN KDGPTNALMW LRGDTADRSL QSLNFQGLGM APWMQQRLDP 420 SLLGNEHDQR YQTITAAALQ DIRGGDPMKQ QYMQFQQPLQ YLQQSCNPNQ LLQEQQIIQQ 480 SHPQQILHAQ SQTMSDNQSS PILQQPPNGQ HSQNQQSQQH NFQQNFQIPN NQFEQHETPM 540 STFVHKPDFT DSNITFSAPL SPSIQNMLGS ICPEGSGNLL NFSRTSQSML NDQQNQQSWA 600 PKFSYSQANN FGNSGSLPPF PGKDGIVEPD NCSGDTQTQQ FFGVNMDSSP LLIPGAVPTL 660 GSTSIDAEVS PMPFDGSGYQ RSLFGCVDDS SEFVQSAAPV DPPTRTFVKV YKSGSTVGRS 720 LDIGRFSSYD ELREELGQMF GVEGQLGPLR SGWQLVFVDR ENDVLLLGDD PWEAFVNNVW 780 YIKILSPEDV LKLGKHGIES LSSNGQRLNS NTCDSRNLVS GISSVGSLEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G37020.1 | 0.0 | ARF family protein |