PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026402708.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | B3 | ||||||||
Protein Properties | Length: 533aa MW: 60252.4 Da PI: 9.6491 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.4 | 1.1e-12 | 29 | 119 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ ++++ k++rl +p +f++++g++ s +++ +sg W++ l ++++g + ++ G +eF + + +g +vF+++++s+f +v XP_026402708.1 29 FFKII-QAHAIKHKRLGIPEEFLKKFGNE--LSDSAIIKVPSGSIWRIGL--TNRGGVTSFEYGCQEFMEFYSISVGHLLVFRYNRNSRF--HVL 116 66655.99***************999855..7778999************..9**999**************************999999..999 PP EE- CS B3 96 vfr 98 +f+ XP_026402708.1 117 IFD 119 997 PP | |||||||
2 | B3 | 65.4 | 8.4e-21 | 300 | 395 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ ++ + ++g++ +p +fa+ + + +++ +tl ++g+ W+v l+ + ksg+++l+kGWk+Fv++n+L++gD++vF+ ++ ++fe++v+ XP_026402708.1 300 FFKAVRRPFNISNGLVNMPGNFATPYLK--HRTALVTLSVSDGKLWDVSLTSSIKSGTTTLSKGWKQFVSDNQLNQGDVCVFEPVDPKKFEMNVH 392 889999999999***********99953..356689999********************************************9988******** PP EE- CS B3 96 vfr 98 +fr XP_026402708.1 393 IFR 395 *98 PP | |||||||
3 | B3 | 58.9 | 8.9e-19 | 434 | 527 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 fkv++ +l++g +++p fa + + ++++++ + g++We++++ k++r l kGW +Fv +n+L+egD++vF+l++r++fe++ + XP_026402708.1 434 FKVTMCRTYLTLGHVIVPAAFAVPYL-E--HEIKVRISGRGGKTWEMQCNLLHKPDRAKLLKGWDKFVLDNHLNEGDVCVFELVDRERFEMKAYI 525 67788888899999********9994.2..3468*****************99999999999********************************9 PP E- CS B3 97 fr 98 fr XP_026402708.1 526 FR 527 98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 533 aa Download sequence |
MSSKQMSHQS KKRKKMESSA SASSSPLHFF KIIQAHAIKH KRLGIPEEFL KKFGNELSDS 60 AIIKVPSGSI WRIGLTNRGG VTSFEYGCQE FMEFYSISVG HLLVFRYNRN SRFHVLIFDI 120 SATEIEYPVC NFKTNFKNKA QEIDTDSCSS DSNNENSTQS EPSSSRESQV NLETEPVDEH 180 DFPKQRKVFA ATVTTKRSRF NTSRVTESNE RALRAAEVFL TLSFQFAKKQ IISAVLFERY 240 YMHISFSDSN NETSTQNVSS SSRGGQVNME TEEPVFCSNV TQAKERALAA AEAFTSGNPF 300 FKAVRRPFNI SNGLVNMPGN FATPYLKHRT ALVTLSVSDG KLWDVSLTSS IKSGTTTLSK 360 GWKQFVSDNQ LNQGDVCVFE PVDPKKFEMN VHIFRVFQQT CSGKKLETNA HRAAISVEKS 420 FAAANAFKSK KPYFKVTMCR TYLTLGHVIV PAAFAVPYLE HEIKVRISGR GGKTWEMQCN 480 LLHKPDRAKL LKGWDKFVLD NHLNEGDVCV FELVDRERFE MKAYIFRVVQ SGE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 11 | 15 | KKRKK |
2 | 11 | 41 | KKRKKMESSASASSSPLHFFKIIQAHAIKHK |
3 | 12 | 42 | KKRKKMESSASASSSPLHFFKIIQAHAIKHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 5e-23 | B3 family protein |