PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402499.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 479aa MW: 54231 Da PI: 4.6945

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	109.5	3.8e-34	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..... 79 lp+G++F+P+d+e++++ L +kv +++ + + v+++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ XP_026402499.1 58 LPRGVKFDPSDQEIIWH-LLAKVGHNNmkphpfI---DefiptVVEDDGICYTHPQNLP-GVKQDGNVAHFFHRAIKAYNTGTRKRRKIHgddqg 147 799**********65.5566666663555442...144444577778******.777888999**************85555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tg++k+v+ +g + g+kk++v+y +r++k+ekt+Wvmh+y+l XP_026402499.1 148 DVRWHKTGRTKPVIL-DGVQRGCKKIMVLYisMARRKKPEKTNWVMHQYHL 197 788********.99********7767999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MAGTSWLVDS RRIATKIMSA SEKCDPRTVQ WRSDPTRACP NCDHVIDNSD VIQAWPGLPR 60 GVKFDPSDQE IIWHLLAKVG HNNMKPHPFI DEFIPTVVED DGICYTHPQN LPGVKQDGNV 120 AHFFHRAIKA YNTGTRKRRK IHGDDQGDVR WHKTGRTKPV ILDGVQRGCK KIMVLYISMA 180 RRKKPEKTNW VMHQYHLGTA EEEKDGEFVV SKVFYQQQLK PGDKVEQDLS LEETDSITAK 240 VDPVTPKSVI PEPPRAGNQH SDVNPRQELE FSIMETSEEN LETGELDDDM LAELGRIHDH 300 SHLKGEDSGC QAAEDDNHQT EENYNPTGVD YDNHAMDDTS FSQLLFDSEQ MVFNSQQMVE 360 GLSLCDEFLQ SQSPHRVEGG VGKERKIKSR LSDYALGAED LKKDLEECQR LGSPDPINNG 420 GEEDVGYAQT DNQENRQDSE QSQNLGIFDP SNLDLDTPPD FRLSQLEFGS QDIYAWKGF

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MAGTSWLVDS RRIATKIMSA SEKCDPRTVQ WRSDPTRACP NCDHVIDNSD VIQAWPGLPR  60
GVKFDPSDQE IIWHLLAKVG HNNMKPHPFI DEFIPTVVED DGICYTHPQN LPGVKQDGNV  120
AHFFHRAIKA YNTGTRKRRK IHGDDQGDVR WHKTGRTKPV ILDGVQRGCK KIMVLYISMA  180
RRKKPEKTNW VMHQYHLGTA EEEKDGEFVV SKVFYQQQLK PGDKVEQDLS LEETDSITAK  240
VDPVTPKSVI PEPPRAGNQH SDVNPRQELE FSIMETSEEN LETGELDDDM LAELGRIHDH  300
SHLKGEDSGC QAAEDDNHQT EENYNPTGVD YDNHAMDDTS FSQLLFDSEQ MVFNSQQMVE  360
GLSLCDEFLQ SQSPHRVEGG VGKERKIKSR LSDYALGAED LKKDLEECQR LGSPDPINNG  420
GEEDVGYAQT DNQENRQDSE QSQNLGIFDP SNLDLDTPPD FRLSQLEFGS QDIYAWKGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-161	NAC family protein