PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402416.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 456aa MW: 49140.4 Da PI: 6.3053

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.6	3.8e-37	99	244	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_026402416.1 99 PPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTISAPsqfmrna 193 789******************************************************************99987777777777444445556666 PP TCP 89 ...........................kaaksaakskksqksaasalnlak 112 +++ +a + +s+++++s ln+a+ XP_026402416.1 194 yfnqsfltpqlrmrsewernidesssqRQNLFAGGGFSSENPSSSLLNFAA 244 666666666666666666666666555333333344444444444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MDGDSGNIRW PNFPLQLLEK KEEYQEEEED DDDEDNNNNN NNSNSNLCSS RSGGYNPSLS 60 ISAEATTSNT MIGSNSGGNL LTTTADHDSN QLPLVKKPPP KRTSTKDRHT KVDGRGRRIR 120 MPAACAARVF QLTKELGHKS DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG 180 STISAPSQFM RNAYFNQSFL TPQLRMRSEW ERNIDESSSQ RQNLFAGGGF SSENPSSSLL 240 NFAATSNMMN PNLLHAKQEF HEMSSNTADH QGNIERKNVI STSITSQQQQ QQQHQMGSYL 300 STNHGQQIPA AAAFWMVSNP NNSNNQVMNA SDNPPPMWPF PTSVSNSNAT HGGGSMSTST 360 NSGLHFMNFA TPLALLPSQQ LGLGMGLRSG GVTAEGHLGM LAALNAYSQA PVHGSGGSGG 420 GGSDDPQTCG FHSQHHHHGA GNDHDQQQHD TSSHHS

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MDGDSGNIRW PNFPLQLLEK KEEYQEEEED DDDEDNNNNN NNSNSNLCSS RSGGYNPSLS  60
ISAEATTSNT MIGSNSGGNL LTTTADHDSN QLPLVKKPPP KRTSTKDRHT KVDGRGRRIR  120
MPAACAARVF QLTKELGHKS DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG  180
STISAPSQFM RNAYFNQSFL TPQLRMRSEW ERNIDESSSQ RQNLFAGGGF SSENPSSSLL  240
NFAATSNMMN PNLLHAKQEF HEMSSNTADH QGNIERKNVI STSITSQQQQ QQQHQMGSYL  300
STNHGQQIPA AAAFWMVSNP NNSNNQVMNA SDNPPPMWPF PTSVSNSNAT HGGGSMSTST  360
NSGLHFMNFA TPLALLPSQQ LGLGMGLRSG GVTAEGHLGM LAALNAYSQA PVHGSGGSGG  420
GGSDDPQTCG FHSQHHHHGA GNDHDQQQHD TSSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	5e-48	TCP family protein