PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402407.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 279aa MW: 31465.5 Da PI: 9.3074

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.2	1.3e-15	82	140	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpse....ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++g+++A+++d ++ ++ k k+++lg + t+e+Aa+a++ a++kl+g XP_026402407.1 82 NFRGVTRHRWTGKFEAHLWDNTTisetRKrKGKQVYLGGYETEEKAAQAYDLAALKLWG 140 69****************655665433555***********************98 PP
2	AP2	45.1	2.5e-14	185	236	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++ + rW A+I + + ++lg+++t+eeAa+a++ a+ kl+g XP_026402407.1 185 SIYRGVTRQHEGRRWQARIGRV-----AggRDIYLGTYDTEEEAAEAYDIAAVKLRG 236 57**988889999885.....234***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
METLVPASEN EICLLNQEVS LIDQVSIVAD YERLPSSNDS SSKLIPPPSS SSSVNVNPAS 60 SSATGNEQVK KALYKVGQRT SNFRGVTRHR WTGKFEAHLW DNTTISETRK RKGKQVYLGG 120 YETEEKAAQA YDLAALKLWG AGAHSKMNFP ISNYAKEVEE MKDMSREEYI NSLRRKSICF 180 ARGNSIYRGV TRQHEGRRWQ ARIGRVAGGR DIYLGTYDTE EEAAEAYDIA AVKLRGMSAI 240 TNFHISNYYK EGSKELDIIP IDVTEKELPK VKIRRFIMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	5e-73	AP2 family protein