PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402260.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 398aa MW: 44586.3 Da PI: 7.7658

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.5	1.4e-35	39	131	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k+ll++ XP_026402260.1 39 FLTKTYQLVDDPNTDHVVSWGEDDSTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFRKGEKHLLCE 124 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_026402260.1 125 IHRRKTS 131 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MALMLDSNNN NNMMNNSSSC EGGSILLALD SNKSVPAPFL TKTYQLVDDP NTDHVVSWGE 60 DDSTFVVWRP PEFARDLLPN YFKHNNFSSF VRQLNTYGFR KIVPDRWEFA NEFFRKGEKH 120 LLCEIHRRKT SQPQQVSING GGSGFYNPFT NRLSISPSDD NSDDQVSWCD SADPLLLSSP 180 QSHYQYHVAG GGGGFNMNGG GCNGNTSSIM ALSEDNERLR RSNSMLVSEL AHMKKLYNDI 240 IYFVQNHVKP AAHPTSNTYS SQSPFVITNN NTSNPTSTSL AVQNKPQNYQ NQNLGFNSQQ 300 PIPPKQSHYH HQQQQQHHFK VPLSPNATTN NTTSSTSLPM LEEHNNNNGS SKTKLFGVSL 360 YSSKKRLHPE PPSDMDINKS RSMLSKNDLG LNLMPSSY

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MALMLDSNNN NNMMNNSSSC EGGSILLALD SNKSVPAPFL TKTYQLVDDP NTDHVVSWGE  60
DDSTFVVWRP PEFARDLLPN YFKHNNFSSF VRQLNTYGFR KIVPDRWEFA NEFFRKGEKH  120
LLCEIHRRKT SQPQQVSING GGSGFYNPFT NRLSISPSDD NSDDQVSWCD SADPLLLSSP  180
QSHYQYHVAG GGGGFNMNGG GCNGNTSSIM ALSEDNERLR RSNSMLVSEL AHMKKLYNDI  240
IYFVQNHVKP AAHPTSNTYS SQSPFVITNN NTSNPTSTSL AVQNKPQNYQ NQNLGFNSQQ  300
PIPPKQSHYH HQQQQQHHFK VPLSPNATTN NTTSSTSLPM LEEHNNNNGS SKTKLFGVSL  360
YSSKKRLHPE PPSDMDINKS RSMLSKNDLG LNLMPSSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	3e-95	HSF family protein