PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401863.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 373aa MW: 41208.6 Da PI: 8.8141

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.8	5.2e-25	84	128	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_026401863.1 84 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVET 128 79****************************************997 PP
2	QLQ	65.9	9.5e-23	23	58	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l++KyL+a++PvPpeL+++i+k XP_026401863.1 23 PFTASQWQELEHQALIFKYLMAGLPVPPELVLPIKK 58 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MNNSSAAVAT AVTTDTVNVF RPPFTASQWQ ELEHQALIFK YLMAGLPVPP ELVLPIKKSF 60 ESMSARFFHH PTMGYCSFYG KKADPEPGRC RRTDGKKWRC SKDAYPDSKY CERHMHRGRN 120 RSRKPVETQS ISQSSTVTSL TASTGNNGGN TVSCVGSVVG GGGSSGNGSF QNLPLMGNHQ 180 VLCSGNNSIS SNNNNPSLLQ MDSVPYGIPS KDYRYYHGMK PDNDGHSFFS EASANTRGGL 240 GMESSMDNSW RLMSPRVSSF PQTKSRKGSF MQSDYSQMHS LPDISQASID TVLSKQHQQQ 300 QHCFFGSDYG SSQPVKQEGQ SLRPFFDEWP KTRDSWSDLD DERSNRSAFS TTQLSISIPM 360 NFSATSSRSP NDA

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MNNSSAAVAT AVTTDTVNVF RPPFTASQWQ ELEHQALIFK YLMAGLPVPP ELVLPIKKSF  60
ESMSARFFHH PTMGYCSFYG KKADPEPGRC RRTDGKKWRC SKDAYPDSKY CERHMHRGRN  120
RSRKPVETQS ISQSSTVTSL TASTGNNGGN TVSCVGSVVG GGGSSGNGSF QNLPLMGNHQ  180
VLCSGNNSIS SNNNNPSLLQ MDSVPYGIPS KDYRYYHGMK PDNDGHSFFS EASANTRGGL  240
GMESSMDNSW RLMSPRVSSF PQTKSRKGSF MQSDYSQMHS LPDISQASID TVLSKQHQQQ  300
QHCFFGSDYG SSQPVKQEGQ SLRPFFDEWP KTRDSWSDLD DERSNRSAFS TTQLSISIPM  360
NFSATSSRSP NDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-48	GRF family protein