PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401575.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 573aa MW: 64714.3 Da PI: 6.7013

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.2	7.9e-28	324	377	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++Wt++LH+rFv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYRl XP_026401575.1 324 KMKVDWTQDLHKRFVKAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRL 377 5689***************.******************************8 PP
2	Myb_DNA-binding	43	1.1e-13	327	376	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+++++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_026401575.1 327 VDWTQDLHKRFVKAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 376 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MVCTTDDLLE WKDFPKGLRI LLLDEDIHSA AEIKLKLEQM DYIVSAFCDE NEAMEALSNK 60 CESYHVAIVE VSTGNNLGSF KFLENAKDLP TIMISSTHCV STTMKCIACF SNFQLGAAEF 120 LQKPLSEEKL RNIWQHVVHK AFNAGEHSLS KMLNPTKETI PPVLQLPVEK DESKVQTSLV 180 EIEDLTRRHE LHHDLSTASD KFPAPSTPQL KQSGRLLGES ECQEQPNCPV EKDPMDHDGD 240 AKSVENSCNI SIENITAKVD SSSMLVNDSI KEVGSTSGSK SPNHLRPEQK SKDSIINSKV 300 EAGNPKKAST SNQNSYVTRA SRKKMKVDWT QDLHKRFVKA VEQLGVDQAI PSRILELMKV 360 EGLTRHNVAS HLQKYRLNRR HILPKEEDRR WHHPKDNRHS TPRSNYQQHK PIMAYPSYPP 420 SSHPICHVWG HPISHLPPPT AQTWGHPSFP AWQTPENWQW KTFHGMHVDA WGCPVMPPSQ 480 NPNFTIPQMQ NNASAGYQSL LDTTFEDSSR MAMIESNQLA EEVIDKAVKE AVDMPWLPLP 540 LGLKPPSTES VLFELQRQGI SIIPPQNPNT MWQ

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MVCTTDDLLE WKDFPKGLRI LLLDEDIHSA AEIKLKLEQM DYIVSAFCDE NEAMEALSNK  60
CESYHVAIVE VSTGNNLGSF KFLENAKDLP TIMISSTHCV STTMKCIACF SNFQLGAAEF  120
LQKPLSEEKL RNIWQHVVHK AFNAGEHSLS KMLNPTKETI PPVLQLPVEK DESKVQTSLV  180
EIEDLTRRHE LHHDLSTASD KFPAPSTPQL KQSGRLLGES ECQEQPNCPV EKDPMDHDGD  240
AKSVENSCNI SIENITAKVD SSSMLVNDSI KEVGSTSGSK SPNHLRPEQK SKDSIINSKV  300
EAGNPKKAST SNQNSYVTRA SRKKMKVDWT QDLHKRFVKA VEQLGVDQAI PSRILELMKV  360
EGLTRHNVAS HLQKYRLNRR HILPKEEDRR WHHPKDNRHS TPRSNYQQHK PIMAYPSYPP  420
SSHPICHVWG HPISHLPPPT AQTWGHPSFP AWQTPENWQW KTFHGMHVDA WGCPVMPPSQ  480
NPNFTIPQMQ NNASAGYQSL LDTTFEDSSR MAMIESNQLA EEVIDKAVKE AVDMPWLPLP  540
LGLKPPSTES VLFELQRQGI SIIPPQNPNT MWQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-127	ARR-B family protein