PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401324.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 382aa MW: 41337.9 Da PI: 9.9337

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118	1.2e-36	86	194	2	97
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssasec.eaess 78 ++ + +++++hTkv+gR+RRvR++a+caar+F+L++eLG+++d++ti WLl+ a+p+i+++tgt ++s++s++ +++ XP_026401324.1 86 TTTRASTKDRHTKVEGRGRRVRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPSIIAATGTgtipaiamsiggtlkipTTSPSSNTvNNK-- 178 567899**********************************************************44444444444444333222222221111.. PP TCP 79 sssasnsssg......kaaksaaks 97 + a ++++k+ XP_026401324.1 179 ---------QvlvdvgTADQNQTKK 194 .........1233332122222111 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MASIQKQEQV DQESNRNNPP LTVSQPPPPQ TPGDPVTTEQ KAQSIQQVIS LMKEEQEEEV 60 IEDEIHEALP IQKIPPLQTN TQIKKTTTRA STKDRHTKVE GRGRRVRMPA TCAARIFQLT 120 RELGHKSDGE TIRWLLEHAE PSIIAATGTG TIPAIAMSIG GTLKIPTTSP SSNTVNNKQV 180 LVDVGTADQN QTKKRKRPAN SEFFDISTTT SDGVSVSSGL APISRITTSA TTGVIGAAQA 240 QPPPQGFMPM WAFSNPSNTA GTFWMIPPNS AIATGPVVSS LQPQLWSFPS TVTPLVNIST 300 RPISSFITMQ PSIIQLHHPV IPPPATTTIF PNSPVPKSSN KSAMSPASSS TPTITTTTTT 360 QMLREFSMEI LDRQELQLMG RK

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MASIQKQEQV DQESNRNNPP LTVSQPPPPQ TPGDPVTTEQ KAQSIQQVIS LMKEEQEEEV  60
IEDEIHEALP IQKIPPLQTN TQIKKTTTRA STKDRHTKVE GRGRRVRMPA TCAARIFQLT  120
RELGHKSDGE TIRWLLEHAE PSIIAATGTG TIPAIAMSIG GTLKIPTTSP SSNTVNNKQV  180
LVDVGTADQN QTKKRKRPAN SEFFDISTTT SDGVSVSSGL APISRITTSA TTGVIGAAQA  240
QPPPQGFMPM WAFSNPSNTA GTFWMIPPNS AIATGPVVSS LQPQLWSFPS TVTPLVNIST  300
RPISSFITMQ PSIIQLHHPV IPPPATTTIF PNSPVPKSSN KSAMSPASSS TPTITTTTTT  360
QMLREFSMEI LDRQELQLMG RK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-49	TCP family protein