PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026401132.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 347aa    MW: 37952.1 Da    PI: 4.7466
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026401132.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.00031298339854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r RR+r+++    L+ l+P       k  + +++  +A++YIksL
  XP_026401132.1 298 NKRLRRERVRETVKILQNLIPGG-----KDKDAIMVIDEAIQYIKSL 339
                     5699*****************97.....33678*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MEKDLQLSNL NSPGFTLDSN PGDYLRTCTN RYPSMVPPNA SLPGYNAAGL PQSKIGQVNE  60
PNGWFYCLPR HRQTLTPLPN SAPKELASSP YRHGGIDGCG AGAVPSSLAG SDQKRFLVFD  120
QSGDQTSLFY SSAVGSNARH PCYDGAKSLH ITGSQKDDLT SNRELIPHCQ VASVPLEESQ  180
ESGDRSEMHE DTEELNALLY SDDECDSDDE EISTGHSPRD VIGCQDLEEV GENLVDIVSS  240
ACPTKRKRVL EEDHYNASLL DTASSGIANH SVECNDDAES SCAGGSMRQK DMESLPVNKR  300
LRRERVRETV KILQNLIPGG KDKDAIMVID EAIQYIKSLK FKARSMK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1300305RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.21e-09bHLH family protein