PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401017.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 992aa MW: 112119 Da PI: 4.7722

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	1e-13	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_026401017.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.8	1.6e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_026401017.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 992 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPNDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDNRQR KRKRKGIDYN AEIPFEKKPP AGFYDIVDED RPVEQPQFPT 240 TIEELEGKRR ADVEAQLRKQ DVAKNKIAQR QDAPSSVLQV NKLNDPETVR KRSKLMLPAP 300 QITDHELEEI AKMGFASDLL AGSEAEGSGA TRALLANYSQ TPRQGMTPFR TPQRTPGGKA 360 DAIMMEAENL ARLRESQTPL LGGDNPDLHP SDFSGVTPKR RDIQTPNPMA TPLSTPGASG 420 VTPRIGMTPS NDAYSSGMTP RGTPLRDELH INEDMDMPES LKHDLHRQAE LRRNLQSGLI 480 NLPQPRNEYQ IVIQPLPQGN DEPEDMIEED MSDRIAREKA EEEARQQALL KKRSKVLQRE 540 LPRPPPASLE LIRNSLVRTD EDKSSFVPPT PIEQADEMVR KELLGLLEHD NAKYPLDEKV 600 EKEKKKGGKR ASNGKSASIP EIEDFEEEEM KEADLLIREE IQFLRVAMRH ENEPIDEYVR 660 VHDACLEDIM YFPARGAYGL SSVANNMEKL GALQNEFENV KKRMDDETKK AQRLEQKIKL 720 LTHGYQMLGG KLWTQAEATF KQMDTAATEL ECFQALQKQE QLAASYRING LEEEVKKQKE 780 LEKNLQHRYG NLIAEQDKIE RLFEEYRSQE KLQEETKARE LDLPSATNET DNAQSNGEQN 840 STATMDVDTS IAAVEEDKEV QLQGSNCEGP TDEMNIDPST DSMAVDLGGS AEISKEETNG 900 LGCDGNQMSE IPKENEPEIP KKDEQIVDTI SDQNSKADDI SSNGDGITQH AADDLSKEAP 960 SADENLIQKP TEMVDAVTDL VSETTESGDG RE

Sequence ? help Back to Top

Protein Sequence Length: 992 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPNDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDNRQR KRKRKGIDYN AEIPFEKKPP AGFYDIVDED RPVEQPQFPT  240
TIEELEGKRR ADVEAQLRKQ DVAKNKIAQR QDAPSSVLQV NKLNDPETVR KRSKLMLPAP  300
QITDHELEEI AKMGFASDLL AGSEAEGSGA TRALLANYSQ TPRQGMTPFR TPQRTPGGKA  360
DAIMMEAENL ARLRESQTPL LGGDNPDLHP SDFSGVTPKR RDIQTPNPMA TPLSTPGASG  420
VTPRIGMTPS NDAYSSGMTP RGTPLRDELH INEDMDMPES LKHDLHRQAE LRRNLQSGLI  480
NLPQPRNEYQ IVIQPLPQGN DEPEDMIEED MSDRIAREKA EEEARQQALL KKRSKVLQRE  540
LPRPPPASLE LIRNSLVRTD EDKSSFVPPT PIEQADEMVR KELLGLLEHD NAKYPLDEKV  600
EKEKKKGGKR ASNGKSASIP EIEDFEEEEM KEADLLIREE IQFLRVAMRH ENEPIDEYVR  660
VHDACLEDIM YFPARGAYGL SSVANNMEKL GALQNEFENV KKRMDDETKK AQRLEQKIKL  720
LTHGYQMLGG KLWTQAEATF KQMDTAATEL ECFQALQKQE QLAASYRING LEEEVKKQKE  780
LEKNLQHRYG NLIAEQDKIE RLFEEYRSQE KLQEETKARE LDLPSATNET DNAQSNGEQN  840
STATMDVDTS IAAVEEDKEV QLQGSNCEGP TDEMNIDPST DSMAVDLGGS AEISKEETNG  900
LGCDGNQMSE IPKENEPEIP KKDEQIVDTI SDQNSKADDI SSNGDGITQH AADDLSKEAP  960
SADENLIQKP TEMVDAVTDL VSETTESGDG RE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KRRELKAAGIDNRQRKRKRK
2	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein