PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026400951.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 548aa MW: 60757.7 Da PI: 6.7731

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026400951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.3	4.4e-16	370	416	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_026400951.1 370 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 416 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MNRWCVPDFE VEEDHHLIPS SSGLHRPPNN KPSKHGGDEL VELLWENGQL VNQNHKSLRK 60 KTHHYSNSKY PYQSPQDDFG AASISGRREF QDMGSRLMEE TGEGAAATGS QHLFMEEDEM 120 ASWLHYPLSP DDNSAFRPRF ADDNNNNNNH SNLVYPAQFG GDYTPPQPPP QPPVNRITQI 180 IDDRPTEHKL PAPTPPEHKF SAATPPTPPE HKFSAATPAP APHRPPIPTP MSSSSSSKFH 240 NFGHFSRHKV LQSDESQPTT SDKMRTGSAV LGSSCETPPM WASKSSDTAV PEKDEAAVAS 300 EQMTTRTSSS AGSGAGAEPS TKMPTEDRKR KARETDEQEY QSEDDKFESV DTKKQARGST 360 SARRARAAEV HNLSERRRRD RINEKMKALQ ELIPRCNKSD KASMLDEAIE YLKSLQLQVQ 420 MMSMGCGMVP MMFPPGVQQY MSPMGMGMGM GMGMDFGLNR PMMMPYASVL APRPAHLGQT 480 PPVPGFHVPP PPANTNNSPR PPIFPADPYQ NYFNSLHMQV PRHPDQNESM VQPCPSKGAE 540 GDNNHKPG

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MNRWCVPDFE VEEDHHLIPS SSGLHRPPNN KPSKHGGDEL VELLWENGQL VNQNHKSLRK  60
KTHHYSNSKY PYQSPQDDFG AASISGRREF QDMGSRLMEE TGEGAAATGS QHLFMEEDEM  120
ASWLHYPLSP DDNSAFRPRF ADDNNNNNNH SNLVYPAQFG GDYTPPQPPP QPPVNRITQI  180
IDDRPTEHKL PAPTPPEHKF SAATPPTPPE HKFSAATPAP APHRPPIPTP MSSSSSSKFH  240
NFGHFSRHKV LQSDESQPTT SDKMRTGSAV LGSSCETPPM WASKSSDTAV PEKDEAAVAS  300
EQMTTRTSSS AGSGAGAEPS TKMPTEDRKR KARETDEQEY QSEDDKFESV DTKKQARGST  360
SARRARAAEV HNLSERRRRD RINEKMKALQ ELIPRCNKSD KASMLDEAIE YLKSLQLQVQ  420
MMSMGCGMVP MMFPPGVQQY MSPMGMGMGM GMGMDFGLNR PMMMPYASVL APRPAHLGQT  480
PPVPGFHVPP PPANTNNSPR PPIFPADPYQ NYFNSLHMQV PRHPDQNESM VQPCPSKGAE  540
GDNNHKPG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	375	380	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.1	1e-31	bHLH family protein