PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026400671.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 361aa    MW: 41505.7 Da    PI: 4.7536
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026400671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.17.8e-2096177389
            FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     Y++Y+ke+GF vrk++++k+  +g + +  ++C+k+gk++ +++      ++++++r++Cka l+ +++ d+kwe+++++  HnH +
  XP_026400671.1  96 YKTYGKETGFAVRKRTQRKN-PSGVVRSFSYCCNKHGKPSVNRNP----AKQNKTNRCECKAGLTARLTPDNKWEISTFHAAHNHIV 177
                     9**************99998.8999***************99877....89999*******************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MVVGSEQPEL YPITDDDEND KGDDDVDFKL SEDKDEEGDE FDGTNKVDDD VDFKLSDSED  60
DEGDENDGNE EDCGYGDNDI YAGKFFDFIS EIKLAYKTYG KETGFAVRKR TQRKNPSGVV  120
RSFSYCCNKH GKPSVNRNPA KQNKTNRCEC KAGLTARLTP DNKWEISTFH AAHNHIVSSE  180
MSRMMPCYRH IPPDVRHRLD ANDQSGIKMH KSYISVVNEN GGYHNMTCTE KDCRNITKDL  240
RELRLGKGYA EAIIRYFMNK VSHKSNEHED FYYAIDVDEE KHLRNVFWAD GWCREAYKEF  300
GEVVTFDTTY LTNQYHMPFA PFVGTAHFRT DHSKEQASDL QLTIDSFSLN QGFILVLVDL  360
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-30FAR1 family protein