PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026400500.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 335aa    MW: 37083.9 Da    PI: 8.6257
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026400500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.91.2e-17152184133
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                     CsnC + +Tp+WR gp+g ktLCnaCG++y+k+
  XP_026400500.1 152 CSNCSSPTTPQWRVGPSGAKTLCNACGIRYKKQ 184
                     *******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MSEASLAESK SAEYYISEVQ RIYRQNDCSH VSVVEELGAF FSDSFRPGLS HISLKNLKTC  60
LKQGVTDLSK EVDQMVEPVL GMHRITSSLK DKERGIVSSL PSKKQRSSSS STSISTPTRS  120
DSIGPQSSAQ GSGSDTVVSD ESGRKGGKGK RCSNCSSPTT PQWRVGPSGA KTLCNACGIR  180
YKKQKAASDA EGAEDDTETV NDYLLTLLED GGMQAKAALY KHNDELAKQL EHMEQKLEEL  240
LDIVVSKCRQ MNIAEKQQLR NLIQTLSPKN LDRVVQIIKR RKLPKGGQTF YELNIDLDKE  300
DNGTLWRLYY YVRAAENAKR LSLAELQQGK VVVIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08000.28e-10GATA family protein