PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026400388.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NAC
Protein Properties Length: 381aa    MW: 42385.6 Da    PI: 4.4511
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026400388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.83.2e-136711876128
             NAM  76 ratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +a ++gyW +  ++ e+++ ++ ++g + tL f++g+ap+gekt+W+mh yr+
  XP_026400388.1  67 KASETGYWMEAEEECEIHT-DSPTIGSRSTLQFFSGQAPDGEKTNWMMHAYRI 118
                     45678*************9.999****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MCPSAPFSPT TEDIGLCWPG ELLVMCLERM ICGDPIPANV NTEINPYLDL PWLLNDSIWY  60
LHSWDLKASE TGYWMEAEEE CEIHTDSPTI GSRSTLQFFS GQAPDGEKTN WMMHAYRIQQ  120
KRLLEINKEG NSSSLCRVFT KRGQSPSNKE EQHGSGGCDG IDNNALLNST ELDPNLKHPT  180
IKCQVISKNE KHDPTKVSDR QPIPANSIHD NEIYDFSMGD YLELEDLNDP LESSFSSSEN  240
SICSTLASSE HFDYFDSSAL LRDMDNDLDT QRNHTDNISG LLRPVNAAVR GDSSGAEQQL  300
LDTEALEDAR NRQTAGDRDV NELTNSSQDE VASSSSSNSN GSVRAAASPT SSENKDDVAG  360
RRRSRSRIAK LRKKYLCFIS C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1361374RRRSRSRIAKLRKK
2363376RRRSRSRIAKLRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.13e-21NAC family protein